add pr check for node version

.eslintignore

@@ -0,0 +1,4 @@
+**/webpack.config.js
+lib/**
+src/testdata/**
+tests/**

.eslintrc.json

@@ -0,0 +1,77 @@
+
+{
+    "parser": "@typescript-eslint/parser",
+    "parserOptions": {
+        "project": "./tsconfig.json"
+    },
+    "plugins": ["@typescript-eslint", "filenames", "github", "import", "no-async-foreach"],
+    "extends": [
+        "eslint:recommended",
+        "plugin:@typescript-eslint/recommended",
+        "plugin:@typescript-eslint/recommended-requiring-type-checking",
+        "plugin:github/recommended",
+        "plugin:github/typescript",
+        "plugin:import/typescript"
+    ],
+    "rules": {
+        "filenames/match-regex": ["error", "^[a-z0-9-]+(\\.test)?$"],
+        "i18n-text/no-en": "off",
+        "import/extensions": ["error", {
+            // Allow importing JSON files
+            "json": {}
+        }],
+        "import/no-amd": "error",
+        "import/no-commonjs": "error",
+        "import/no-cycle": "error",
+        "import/no-dynamic-require": "error",
+        // Disable the rule that checks that devDependencies aren't imported since we use a single
+        // linting configuration file for both source and test code.
+        "import/no-extraneous-dependencies": ["error", {"devDependencies": true}],
+        "import/no-namespace": "off",
+        "import/no-unresolved": "error",
+        "import/no-webpack-loader-syntax": "error",
+        "import/order": ["error", {
+            "alphabetize": {"order": "asc"},
+            "newlines-between": "always"
+        }],
+        "max-len": ["error", {
+            "code": 120,
+            "ignoreUrls": true,
+            "ignoreStrings": true,
+            "ignoreTemplateLiterals": true
+        }],
+        "no-async-foreach/no-async-foreach": "error",
+        "no-console": "off",
+        "no-sequences": "error",
+        "no-shadow": "off",
+        "@typescript-eslint/no-shadow": ["error"],
+        "one-var": ["error", "never"]
+    },
+    "overrides": [{
+        // "temporarily downgraded during transition to eslint
+        "files": "**",
+        "rules": {
+            "@typescript-eslint/ban-types": "off",
+            "@typescript-eslint/explicit-module-boundary-types": "off",
+            "@typescript-eslint/no-explicit-any": "off",
+            "@typescript-eslint/no-unsafe-assignment": "off",
+            "@typescript-eslint/no-unsafe-call": "off",
+            "@typescript-eslint/no-unsafe-member-access": "off",
+            "@typescript-eslint/no-unsafe-return": "off",
+            "@typescript-eslint/no-var-requires": "off",
+            "@typescript-eslint/prefer-regexp-exec": "off",
+            "@typescript-eslint/require-await": "off",
+            "@typescript-eslint/restrict-template-expressions": "off",
+            "func-style": "off",
+            "sort-imports": "off"
+        }
+    }],
+    "settings": {
+        "import/resolver": {
+            "node": {
+                "moduleDirectory": ["node_modules", "src"]
+            },
+            "typescript": {}
+        }
+    }
+}

.github/actions/check-codescanning-config/action.yml

@@ -29,16 +29,7 @@ inputs:
   tools:
     required: true
     description: |
-      The version of CodeQL passed to the `tools` input of the init action.
-      This can be any of the following:
-
-      - A local path to a tarball containing the CodeQL tools, or
-      - A URL to a GitHub release assets containing the CodeQL tools, or
-      - A special value `linked` which is forcing the use of the CodeQL tools
-        that the action has been bundled with.
-
-      If not specified, the Action will check in several places until it finds
-      the CodeQL tools.
+      The url of codeql to use.
 
 runs:
   using: composite
@@ -61,12 +52,11 @@ runs:
     - name: Check config
       working-directory: ${{ github.action_path }}
       shell: bash
-      env:
-        EXPECTED_CONFIG_FILE_CONTENTS: '${{ inputs.expected-config-file-contents }}'
-      run: ts-node ./index.ts "$RUNNER_TEMP/user-config.yaml" "$EXPECTED_CONFIG_FILE_CONTENTS"
+      run: ts-node ./index.ts "${{ runner.temp }}/user-config.yaml" '${{ inputs.expected-config-file-contents }}'
+
     - name: Clean up
       shell: bash
       if: always()
       run: |
-        rm -rf $RUNNER_TEMP/codescanning-config-cli-test
-        rm -rf $RUNNER_TEMP/user-config.yaml
+        rm -rf ${{ runner.temp }}/codescanning-config-cli-test
+        rm -rf ${{ runner.temp }}/user-config.yaml

.github/actions/check-codescanning-config/index.ts

@@ -8,7 +8,7 @@ const actualConfig = loadActualConfig()
 
 const rawExpectedConfig = process.argv[3].trim()
 if (!rawExpectedConfig) {
-  core.setFailed('No expected configuration provided')
+  core.info('No expected configuration provided')
 } else {
   core.startGroup('Expected generated user config')
   core.info(yaml.dump(JSON.parse(rawExpectedConfig)))

.github/actions/check-sarif/action.yml

@@ -16,5 +16,5 @@ inputs:
       Comma separated list of query ids that should NOT be included in this SARIF file.
 
 runs:
-  using: node20
+  using: 'node20'
   main: index.js

.github/actions/prepare-test/action.yml

@@ -2,16 +2,12 @@ name: "Prepare test"
 description: Performs some preparation to run tests
 inputs:
   version:
-    description: "The version of the CodeQL CLI to use. Can be 'linked', 'default', 'nightly-latest', 'nightly-YYYYMMDD', or 'stable-vX.Y.Z"
+    description: "The version of the CodeQL CLI to use. Can be 'latest', 'default', 'nightly-latest', 'nightly-YYYY-MM-DD', or 'stable-YYYY-MM-DD'."
     required: true
   use-all-platform-bundle:
     description: "If true, we output a tools URL with codeql-bundle.tar.gz file rather than platform-specific URL"
     default: 'false'
     required: false
-  setup-kotlin:
-    description: "If true, we setup kotlin"
-    default: 'true'
-    required: true
 outputs:
   tools-url:
     description: "The value that should be passed as the 'tools' input of the 'init' step."
@@ -29,54 +25,36 @@ runs:
     - id: get-url
       name: Determine URL
       shell: bash
-      env:
-        VERSION: ${{ inputs.version }}
-        USE_ALL_PLATFORM_BUNDLE: ${{ inputs.use-all-platform-bundle }}
       run: |
         set -e # Fail this Action if `gh release list` fails.
 
-        if [[ "$VERSION" == "linked" ]]; then
-          echo "tools-url=linked" >> "$GITHUB_OUTPUT"
-          exit 0
-        elif [[ "$VERSION" == "default" ]]; then
-          echo "tools-url=" >> "$GITHUB_OUTPUT"
-          exit 0
-        fi
-
-        if [[ "$VERSION" == "nightly-latest" && "$RUNNER_OS" != "Windows" ]]; then
-          extension="tar.zst"
-        else
-          extension="tar.gz"
-        fi
-
-        if [[ "$USE_ALL_PLATFORM_BUNDLE" == "true" ]]; then
-          artifact_name="codeql-bundle.$extension"
+        if [[ ${{ inputs.use-all-platform-bundle }} == "true" ]]; then
+          artifact_name="codeql-bundle.tar.gz"
         elif [[ "$RUNNER_OS" == "Linux" ]]; then
-          artifact_name="codeql-bundle-linux64.$extension"
+          artifact_name="codeql-bundle-linux64.tar.gz"
         elif [[ "$RUNNER_OS" == "macOS" ]]; then
-          artifact_name="codeql-bundle-osx64.$extension"
+          artifact_name="codeql-bundle-osx64.tar.gz"
         elif [[ "$RUNNER_OS" == "Windows" ]]; then
-          artifact_name="codeql-bundle-win64.$extension"
+          artifact_name="codeql-bundle-win64.tar.gz"
         else
           echo "::error::Unrecognized OS $RUNNER_OS"
           exit 1
         fi
 
-        if [[ "$VERSION" == "nightly-latest" ]]; then
+        if [[ ${{ inputs.version }} == "nightly-latest" ]]; then
           tag=`gh release list --repo dsp-testing/codeql-cli-nightlies -L 1 | cut -f 3`
           echo "tools-url=https://github.com/dsp-testing/codeql-cli-nightlies/releases/download/$tag/$artifact_name" >> $GITHUB_OUTPUT
-        elif [[ "$VERSION" == *"nightly"* ]]; then
-          version=`echo "$VERSION" | sed -e 's/^.*\-//'`
-          echo "tools-url=https://github.com/dsp-testing/codeql-cli-nightlies/releases/download/codeql-bundle-$version/$artifact_name" >> $GITHUB_OUTPUT
-        elif [[ "$VERSION" == *"stable"* ]]; then
-          version=`echo "$VERSION" | sed -e 's/^.*\-//'`
+        elif [[ ${{ inputs.version }} == *"nightly"* ]]; then
+          version=`echo ${{ inputs.version }} | sed -e 's/^.*\-//'`
+          echo "tools-url=https://github.com/dsp-testing/codeql-cli-nightlies/releases/download/codeql-bundle-$version-manual/$artifact_name" >> $GITHUB_OUTPUT
+        elif [[ ${{ inputs.version }} == *"stable"* ]]; then
+          version=`echo ${{ inputs.version }} | sed -e 's/^.*\-//'`
           echo "tools-url=https://github.com/github/codeql-action/releases/download/codeql-bundle-$version/$artifact_name" >> $GITHUB_OUTPUT
+        elif [[ ${{ inputs.version }} == "latest" ]]; then
+          echo "tools-url=latest" >> $GITHUB_OUTPUT
+        elif [[ ${{ inputs.version }} == "default" ]]; then
+          echo "tools-url=" >> $GITHUB_OUTPUT
         else
           echo "::error::Unrecognized version specified!"
           exit 1
         fi
-
-    - uses: fwilhe2/setup-kotlin@9c245a6425255f5e98ba1ce6c15d31fce7eca9da
-      if: ${{ inputs.setup-kotlin == 'true' }}
-      with:
-        version: 1.8.21

.github/actions/query-filter-test/action.yml

@@ -23,16 +23,7 @@ inputs:
   tools:
     required: true
     description: |
-      The version of CodeQL passed to the `tools` input of the init action.
-      This can be any of the following:
-
-      - A local path to a tarball containing the CodeQL tools, or
-      - A URL to a GitHub release assets containing the CodeQL tools, or
-      - A special value `linked` which is forcing the use of the CodeQL tools
-        that the action has been bundled with.
-
-      If not specified, the Action will check in several places until it finds
-      the CodeQL tools.
+      The url of codeql to use.
 
 runs:
   using: composite
@@ -48,6 +39,7 @@ runs:
     - uses: ./../action/analyze
       with:
         output: ${{ runner.temp }}/results
+        upload-database: false
         upload: never
       env:
         CODEQL_ACTION_TEST_MODE: "true"

.github/actions/release-branches/action.yml

@@ -18,11 +18,8 @@ runs:
   using: "composite"
   steps:
     - id: branches
-      env:
-        MAJOR_VERSION: ${{ inputs.major_version }}
-        LATEST_TAG: ${{ inputs.latest_tag }}
       run: |
         python ${{ github.action_path }}/release-branches.py \
-            --major-version "$MAJOR_VERSION" \
-            --latest-tag "$LATEST_TAG"
+            --major-version ${{ inputs.major_version }} \
+            --latest-tag ${{ inputs.latest_tag }}
       shell: bash

.github/actions/release-branches/release-branches.py

@@ -1,19 +1,12 @@
 import argparse
 import json
 import os
-import configparser
+import subprocess
 
 # Name of the remote
 ORIGIN = 'origin'
 
-script_dir = os.path.dirname(os.path.realpath(__file__))
-grandparent_dir = os.path.dirname(os.path.dirname(script_dir))
-
-config = configparser.ConfigParser()
-with open(os.path.join(grandparent_dir, 'releases.ini')) as stream:
-    config.read_string('[default]\n' + stream.read())
-
-OLDEST_SUPPORTED_MAJOR_VERSION = int(config['default']['OLDEST_SUPPORTED_MAJOR_VERSION'])
+OLDEST_SUPPORTED_MAJOR_VERSION = 2
 
 def main():
 

.github/actions/release-initialise/action.yml

@@ -16,14 +16,14 @@ runs:
       shell: bash
 
     - name: Set up Python
-      uses: actions/setup-python@v5
+      uses: actions/setup-python@v4
       with:
-        python-version: 3.12
+        python-version: 3.8
 
     - name: Install dependencies
       run: |
         python -m pip install --upgrade pip
-        pip install PyGithub==2.3.0 requests
+        pip install PyGithub==1.55 requests
       shell: bash
 
     - name: Update git config

.github/actions/setup-swift/action.yml

@@ -11,7 +11,7 @@ runs:
       id: get_swift_version
       if: runner.os == 'Linux'
       shell: bash
-      env:
+      env: 
         CODEQL_PATH: ${{ inputs.codeql-path }}
       run: |
         SWIFT_EXTRACTOR_DIR="$("$CODEQL_PATH" resolve languages --format json | jq -r '.swift[0]')"
@@ -19,7 +19,7 @@ runs:
           VERSION="null"
         else
           VERSION="$("$SWIFT_EXTRACTOR_DIR/tools/linux64/extractor" --version | awk '/version/ { print $3 }')"
-          # Specify 5.x.0, otherwise setup Action will default to latest minor version.
+          # Specify 5.x.0, otherwise setup Action will default to latest minor version. 
           if [ $VERSION = "5.7" ]; then
             VERSION="5.7.0"
           elif [ $VERSION = "5.8" ]; then
@@ -29,11 +29,11 @@ runs:
           # setup-swift does not yet support v5.9.1 Remove this when it does.
           elif [ $VERSION = "5.9.1" ]; then
             VERSION="5.9.0"
-          fi
+          fi 
         fi
         echo "version=$VERSION" | tee -a $GITHUB_OUTPUT
 
-    - uses: redsun82/setup-swift@362f49f31da2f5f4f851657046bdd1290d03edc8 # Please update the corresponding SHA in the CLI's CodeQL Action Integration Test.
+    - uses: swift-actions/setup-swift@f51889efb55dccf13be0ee727e3d6c89a096fb4c # Please update the corresponding SHA in the CLI's CodeQL Action Integration Test.
       if: runner.os == 'Linux' && steps.get_swift_version.outputs.version != 'null'
       with:
         swift-version: "${{ steps.get_swift_version.outputs.version }}"

.github/codeql/codeql-actions-config.yml

@@ -1,4 +0,0 @@
-# Configuration for the CodeQL Actions Queries
-name: "CodeQL Actions Queries config"
-queries:
-  - uses: security-and-quality

.github/copilot-instructions.md

@@ -1,5 +0,0 @@
-# CodeQL Action - Copilot Instructions
-
-The CodeQL Action is written in TypeScript and compiled to JavaScript. Both the TypeScript sources and the **generated** JavaScript code are contained in this repository. The TypeScript sources are contained in the `src` directory and the JavaScript code is contained in the `lib` directory. A GitHub Actions workflow checks that the JavaScript code in `lib` is up-to-date. Therefore, you should not review any changes to the contents of the `lib` folder and it is expected that the JavaScript code in `lib` closely mirrors the TypeScript code it is generated from.
-
-GitHub Actions workflows in the `.github/workflows` directory whose filenames start with two underscores (e.g. `__all-platform-bundle.yml`) are automatically generated using the `pr-checks/sync.sh` script from template files in the `pr-checks/checks` directory. Therefore, you do not need to review files in the `.github/workflows` directory that starts with two underscores. However, you should review changes to the `pr-checks` directory as well as workflows in the `.github/workflows` directory that do not start with underscores.

.github/dependabot.yml

@@ -14,10 +14,6 @@ updates:
       # v7 requires ESM
       - dependency-name: "del"
         versions: ["^7.0.0"]
-      # This is broken due to the way configuration files have changed. 
-      # This might be fixed when we move to eslint v9.
-      - dependency-name: "eslint-plugin-import"
-        versions: [">=2.30.0"]
     groups:
       npm:
         patterns:

.github/releases.ini

@@ -1 +0,0 @@
-OLDEST_SUPPORTED_MAJOR_VERSION=3

.github/update-release-branch.py

@@ -1,7 +1,5 @@
 import argparse
 import datetime
-import fileinput
-import re
 from github import Github
 import json
 import os
@@ -61,7 +59,7 @@ def open_pr(
 
   # Start constructing the body text
   body = []
-  body.append(f'Merging {source_branch_short_sha} into `{target_branch}`.')
+  body.append(f'Merging {source_branch_short_sha} into {target_branch}.')
 
   body.append('')
   body.append(f'Conductor for this PR is @{conductor}.')
@@ -93,7 +91,7 @@ def open_pr(
       'branch to resolve the merge conflicts.')
   body.append(' - [ ] Ensure the CHANGELOG displays the correct version and date.')
   body.append(' - [ ] Ensure the CHANGELOG includes all relevant, user-facing changes since the last release.')
-  body.append(f' - [ ] Check that there are not any unexpected commits being merged into the `{target_branch}` branch.')
+  body.append(f' - [ ] Check that there are not any unexpected commits being merged into the {target_branch} branch.')
   body.append(' - [ ] Ensure the docs team is aware of any documentation changes that need to be released.')
 
   if not is_primary_release:
@@ -172,78 +170,10 @@ def get_current_version():
   with open('package.json', 'r') as f:
     return json.load(f)['version']
 
-# `npm version` doesn't always work because of merge conflicts, so we
-# replace the version in package.json textually.
-def replace_version_package_json(prev_version, new_version):
-  prev_line_is_codeql = False
-  for line in fileinput.input('package.json', inplace = True, encoding='utf-8'):
-    if prev_line_is_codeql and f'\"version\": \"{prev_version}\"' in line:
-      print(line.replace(prev_version, new_version), end='')
-    else:
-      prev_line_is_codeql = False
-      print(line, end='') 
-    if '\"name\": \"codeql\",' in line:
-        prev_line_is_codeql = True 
-
 def get_today_string():
   today = datetime.datetime.today()
   return '{:%d %b %Y}'.format(today)
 
-def process_changelog_for_backports(source_branch_major_version, target_branch_major_version):
-
-  # changelog entries can use the following format to indicate
-  # that they only apply to newer versions
-  some_versions_only_regex = re.compile(r'\[v(\d+)\+ only\]')
-
-  output = ''
-
-  with open('CHANGELOG.md', 'r') as f:
-
-    # until we find the first section, just duplicate all lines
-    found_first_section = False
-    while not found_first_section:
-      line = f.readline()
-      if not line:
-        raise Exception('Could not find any change sections in CHANGELOG.md') # EOF
-
-      if line.startswith('## '):
-        line = line.replace(f'## {source_branch_major_version}', f'## {target_branch_major_version}')
-        found_first_section = True
-
-      output += line
-
-    # found_content tracks whether we hit two headings in a row
-    found_content = False
-    output += '\n'
-    while True:
-      line = f.readline()
-      if not line:
-        break # EOF
-      line = line.rstrip('\n')
-
-      # filter out changenote entries that apply only to newer versions
-      match = some_versions_only_regex.search(line)
-      if match:
-        if int(target_branch_major_version) < int(match.group(1)):
-          continue
-
-      if line.startswith('## '):
-        line = line.replace(f'## {source_branch_major_version}', f'## {target_branch_major_version}')
-        if found_content == False:
-          # we have found two headings in a row, so we need to add the placeholder message.
-          output += 'No user facing changes.\n'
-        found_content = False
-        output += f'\n{line}\n\n'
-      else:
-        if line.strip() != '':
-          found_content = True
-          # we use the original line here, rather than the stripped version
-          # so that we preserve indentation
-          output += line + '\n'
-
-    with open('CHANGELOG.md', 'w') as f:
-      f.write(output)
-
 def update_changelog(version):
   if (os.path.exists('CHANGELOG.md')):
     content = ''
@@ -388,13 +318,19 @@ def main():
       run_git('commit', '--no-edit')
 
     # Migrate the package version number from a vLatest version number to a vOlder version number
-    print(f'Setting version number to {version} in package.json')
-    replace_version_package_json(get_current_version(), version) # We rely on the `Update dependencies` workflow to update package-lock.json
-    run_git('add', 'package.json')
+    print(f'Setting version number to {version}')
+    subprocess.check_output(['npm', 'version', version, '--no-git-tag-version'])
+    run_git('add', 'package.json', 'package-lock.json')
 
     # Migrate the changelog notes from vLatest version numbers to vOlder version numbers
     print(f'Migrating changelog notes from v{source_branch_major_version} to v{target_branch_major_version}')
-    process_changelog_for_backports(source_branch_major_version, target_branch_major_version)
+    subprocess.check_output(['sed', '-i', f's/^## {source_branch_major_version}\./## {target_branch_major_version}./g', 'CHANGELOG.md'])
+
+    # Remove changelog notes from all versions that do not apply to the vOlder branch
+    print(f'Removing changelog notes that do not apply to v{target_branch_major_version}')
+    for v in range(int(source_branch_major_version), int(target_branch_major_version), -1):
+      print(f'Removing changelog notes that are tagged [v{v}+ only\]')
+      subprocess.check_output(['sed', '-i', f'/^- \[v{v}+ only\]/d', 'CHANGELOG.md'])
 
     # Amend the commit generated by `npm version` to update the CHANGELOG
     run_git('add', 'CHANGELOG.md')

.github/workflows/__all-platform-bundle.yml

@@ -7,58 +7,77 @@ name: PR Check - All-platform bundle
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
+  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-      - main
-      - releases/v*
+    - main
+    - releases/v*
   pull_request:
     types:
-      - opened
-      - synchronize
-      - reopened
-      - ready_for_review
-  schedule:
-    - cron: '0 5 * * *'
+    - opened
+    - synchronize
+    - reopened
+    - ready_for_review
   workflow_dispatch: {}
 jobs:
   all-platform-bundle:
     strategy:
-      fail-fast: false
       matrix:
         include:
-          - os: ubuntu-latest
-            version: nightly-latest
+        - os: ubuntu-latest
+          version: nightly-latest
     name: All-platform bundle
     permissions:
       contents: read
-      security-events: read
+      security-events: write
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-      - name: Check out repository
-        uses: actions/checkout@v4
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'true'
-          setup-kotlin: 'true'
-      - name: Install Go
-        uses: actions/setup-go@v5
-        with:
-          go-version: '>=1.21.0'
-          cache: false
-      - id: init
-        uses: ./../action/init
-        with:
-      # Swift is not supported on Ubuntu so we manually exclude it from the list here
-          languages: cpp,csharp,go,java,javascript,python,ruby
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-      - name: Build code
-        shell: bash
-        run: ./build.sh
-      - uses: ./../action/analyze
+    - name: Setup Python on MacOS
+      uses: actions/setup-python@v4
+      if: >-
+        matrix.os == 'macos-latest' && (
+
+        matrix.version == 'stable-20220908' ||
+
+        matrix.version == 'stable-20221211' ||
+
+        matrix.version == 'stable-20230418' ||
+
+        matrix.version == 'stable-v2.13.5' ||
+
+        matrix.version == 'stable-v2.14.6')
+      with:
+        python-version: '3.11'
+    - name: Check out repository
+      uses: actions/checkout@v4
+    - name: Prepare test
+      id: prepare-test
+      uses: ./.github/actions/prepare-test
+      with:
+        version: ${{ matrix.version }}
+        use-all-platform-bundle: 'true'
+    - name: Set environment variable for Swift enablement
+      if: >-
+        runner.os != 'Windows' && (
+            matrix.version == '20220908' ||
+            matrix.version == '20221211'
+        )
+      shell: bash
+      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
+    - id: init
+      uses: ./../action/init
+      with:
+        tools: ${{ steps.prepare-test.outputs.tools-url }}
+    - uses: ./../action/.github/actions/setup-swift
+      with:
+        codeql-path: ${{ steps.init.outputs.codeql-path }}
+    - name: Build code
+      shell: bash
+      run: ./build.sh
+    - uses: ./../action/analyze
+      with:
+        upload-database: false
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__analyze-ref-input.yml

@@ -7,65 +7,82 @@ name: "PR Check - Analyze: 'ref' and 'sha' from inputs"
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
+  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-      - main
-      - releases/v*
+    - main
+    - releases/v*
   pull_request:
     types:
-      - opened
-      - synchronize
-      - reopened
-      - ready_for_review
-  schedule:
-    - cron: '0 5 * * *'
+    - opened
+    - synchronize
+    - reopened
+    - ready_for_review
   workflow_dispatch: {}
 jobs:
   analyze-ref-input:
     strategy:
-      fail-fast: false
       matrix:
         include:
-          - os: ubuntu-latest
-            version: default
-          - os: macos-latest
-            version: default
-          - os: windows-latest
-            version: default
+        - os: ubuntu-latest
+          version: default
+        - os: macos-latest
+          version: default
+        - os: windows-latest
+          version: default
     name: "Analyze: 'ref' and 'sha' from inputs"
     permissions:
       contents: read
-      security-events: read
+      security-events: write
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-      - name: Check out repository
-        uses: actions/checkout@v4
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - name: Install Go
-        uses: actions/setup-go@v5
-        with:
-          go-version: '>=1.21.0'
-          cache: false
-      - uses: ./../action/init
-        with:
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-          languages: cpp,csharp,java,javascript,python
-          config-file: ${{ github.repository }}/tests/multi-language-repo/.github/codeql/custom-queries.yml@${{
-            github.sha }}
-      - name: Build code
-        shell: bash
-        run: ./build.sh
-      - uses: ./../action/analyze
-        with:
-          ref: refs/heads/main
-          sha: 5e235361806c361d4d3f8859e3c897658025a9a2
+    - name: Setup Python on MacOS
+      uses: actions/setup-python@v4
+      if: >-
+        matrix.os == 'macos-latest' && (
+
+        matrix.version == 'stable-20220908' ||
+
+        matrix.version == 'stable-20221211' ||
+
+        matrix.version == 'stable-20230418' ||
+
+        matrix.version == 'stable-v2.13.5' ||
+
+        matrix.version == 'stable-v2.14.6')
+      with:
+        python-version: '3.11'
+    - name: Check out repository
+      uses: actions/checkout@v4
+    - name: Prepare test
+      id: prepare-test
+      uses: ./.github/actions/prepare-test
+      with:
+        version: ${{ matrix.version }}
+        use-all-platform-bundle: 'false'
+    - name: Set environment variable for Swift enablement
+      if: >-
+        runner.os != 'Windows' && (
+            matrix.version == '20220908' ||
+            matrix.version == '20221211'
+        )
+      shell: bash
+      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
+    - uses: ./../action/init
+      with:
+        tools: ${{ steps.prepare-test.outputs.tools-url }}
+        languages: cpp,csharp,java,javascript,python
+        config-file: ${{ github.repository }}/tests/multi-language-repo/.github/codeql/custom-queries.yml@${{
+          github.sha }}
+    - name: Build code
+      shell: bash
+      run: ./build.sh
+    - uses: ./../action/analyze
+      with:
+        upload-database: false
+        ref: refs/heads/main
+        sha: 5e235361806c361d4d3f8859e3c897658025a9a2
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__autobuild-action.yml

@@ -7,69 +7,92 @@ name: PR Check - autobuild-action
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
+  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-      - main
-      - releases/v*
+    - main
+    - releases/v*
   pull_request:
     types:
-      - opened
-      - synchronize
-      - reopened
-      - ready_for_review
-  schedule:
-    - cron: '0 5 * * *'
+    - opened
+    - synchronize
+    - reopened
+    - ready_for_review
   workflow_dispatch: {}
 jobs:
   autobuild-action:
     strategy:
-      fail-fast: false
       matrix:
         include:
-          - os: ubuntu-latest
-            version: linked
-          - os: macos-latest
-            version: linked
-          - os: windows-latest
-            version: linked
+        - os: ubuntu-latest
+          version: latest
+        - os: macos-latest
+          version: latest
+        - os: windows-latest
+          version: latest
     name: autobuild-action
     permissions:
       contents: read
-      security-events: read
+      security-events: write
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-      - name: Check out repository
-        uses: actions/checkout@v4
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - uses: ./../action/init
-        with:
-          languages: csharp
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-      - uses: ./../action/autobuild
-        env:
+    - name: Setup Python on MacOS
+      uses: actions/setup-python@v4
+      if: >-
+        matrix.os == 'macos-latest' && (
+
+        matrix.version == 'stable-20220908' ||
+
+        matrix.version == 'stable-20221211' ||
+
+        matrix.version == 'stable-20230418' ||
+
+        matrix.version == 'stable-v2.13.5' ||
+
+        matrix.version == 'stable-v2.14.6')
+      with:
+        python-version: '3.11'
+    - name: Check out repository
+      uses: actions/checkout@v4
+    - name: Prepare test
+      id: prepare-test
+      uses: ./.github/actions/prepare-test
+      with:
+        version: ${{ matrix.version }}
+        use-all-platform-bundle: 'false'
+    - name: Set environment variable for Swift enablement
+      if: >-
+        runner.os != 'Windows' && (
+            matrix.version == '20220908' ||
+            matrix.version == '20221211'
+        )
+      shell: bash
+      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
+    - uses: ./../action/init
+      with:
+        languages: csharp
+        tools: ${{ steps.prepare-test.outputs.tools-url }}
+    - uses: ./../action/autobuild
+      env:
       # Explicitly disable the CLR tracer.
-          COR_ENABLE_PROFILING: ''
-          COR_PROFILER: ''
-          COR_PROFILER_PATH_64: ''
-          CORECLR_ENABLE_PROFILING: ''
-          CORECLR_PROFILER: ''
-          CORECLR_PROFILER_PATH_64: ''
-      - uses: ./../action/analyze
-      - name: Check database
-        shell: bash
-        run: |
-          cd "$RUNNER_TEMP/codeql_databases"
-          if [[ ! -d csharp ]]; then
-            echo "Did not find a C# database"
-            exit 1
-          fi
+        COR_ENABLE_PROFILING: ''
+        COR_PROFILER: ''
+        COR_PROFILER_PATH_64: ''
+        CORECLR_ENABLE_PROFILING: ''
+        CORECLR_PROFILER: ''
+        CORECLR_PROFILER_PATH_64: ''
+    - uses: ./../action/analyze
+      with:
+        upload-database: false
+    - name: Check database
+      shell: bash
+      run: |
+        cd "$RUNNER_TEMP/codeql_databases"
+        if [[ ! -d csharp ]]; then
+          echo "Did not find a C# database"
+          exit 1
+        fi
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__autobuild-direct-tracing-with-working-dir.yml

@@ -1,80 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     (cd pr-checks; pip install ruamel.yaml@0.17.31 && python3 sync.py)
-# to regenerate this file.
-
-name: PR Check - Autobuild direct tracing (custom working directory)
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request:
-    types:
-      - opened
-      - synchronize
-      - reopened
-      - ready_for_review
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch: {}
-jobs:
-  autobuild-direct-tracing-with-working-dir:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: ubuntu-latest
-            version: linked
-          - os: windows-latest
-            version: linked
-          - os: ubuntu-latest
-            version: nightly-latest
-          - os: windows-latest
-            version: nightly-latest
-    name: Autobuild direct tracing (custom working directory)
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@v4
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - name: Test setup
-        shell: bash
-        run: |
-          # Make sure that Gradle build succeeds in autobuild-dir ...
-          cp -a ../action/tests/java-repo autobuild-dir
-          # ... and fails if attempted in the current directory
-          echo > build.gradle
-      - uses: ./../action/init
-        with:
-          build-mode: autobuild
-          languages: java
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-      - name: Check that indirect tracing is disabled
-        shell: bash
-        run: |
-          if [[ ! -z "${CODEQL_RUNNER}" ]]; then
-            echo "Expected indirect tracing to be disabled, but the" \
-              "CODEQL_RUNNER environment variable is set."
-            exit 1
-          fi
-      - uses: ./../action/autobuild
-        with:
-          working-directory: autobuild-dir
-      - uses: ./../action/analyze
-    env:
-      CODEQL_ACTION_AUTOBUILD_BUILD_MODE_DIRECT_TRACING: true
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__autobuild-direct-tracing.yml

@@ -1,81 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     (cd pr-checks; pip install ruamel.yaml@0.17.31 && python3 sync.py)
-# to regenerate this file.
-
-name: PR Check - Autobuild direct tracing
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request:
-    types:
-      - opened
-      - synchronize
-      - reopened
-      - ready_for_review
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch: {}
-jobs:
-  autobuild-direct-tracing:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: ubuntu-latest
-            version: linked
-          - os: windows-latest
-            version: linked
-          - os: ubuntu-latest
-            version: nightly-latest
-          - os: windows-latest
-            version: nightly-latest
-    name: Autobuild direct tracing
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@v4
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - name: Set up Java test repo configuration
-        shell: bash
-        run: |
-          mv * .github ../action/tests/multi-language-repo/
-          mv ../action/tests/multi-language-repo/.github/workflows .github
-          mv ../action/tests/java-repo/* .
-
-      - uses: ./../action/init
-        id: init
-        with:
-          build-mode: autobuild
-          db-location: ${{ runner.temp }}/customDbLocation
-          languages: java
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-
-      - name: Check that indirect tracing is disabled
-        shell: bash
-        run: |
-          if [[ ! -z "${CODEQL_RUNNER}" ]]; then
-            echo "Expected indirect tracing to be disabled, but the" \
-              "CODEQL_RUNNER environment variable is set."
-            exit 1
-          fi
-
-      - uses: ./../action/analyze
-    env:
-      CODEQL_ACTION_AUTOBUILD_BUILD_MODE_DIRECT_TRACING: true
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__build-mode-autobuild.yml

@@ -1,73 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     (cd pr-checks; pip install ruamel.yaml@0.17.31 && python3 sync.py)
-# to regenerate this file.
-
-name: PR Check - Build mode autobuild
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request:
-    types:
-      - opened
-      - synchronize
-      - reopened
-      - ready_for_review
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch: {}
-jobs:
-  build-mode-autobuild:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: ubuntu-latest
-            version: nightly-latest
-    name: Build mode autobuild
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@v4
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - name: Set up Java test repo configuration
-        run: |
-          mv * .github ../action/tests/multi-language-repo/
-          mv ../action/tests/multi-language-repo/.github/workflows .github
-          mv ../action/tests/java-repo/* .
-
-      - uses: ./../action/init
-        id: init
-        with:
-          build-mode: autobuild
-          db-location: ${{ runner.temp }}/customDbLocation
-          languages: java
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-
-      - name: Validate database build mode
-        run: |
-          metadata_path="$RUNNER_TEMP/customDbLocation/java/codeql-database.yml"
-          build_mode=$(yq eval '.buildMode' "$metadata_path")
-          if [[ "$build_mode" != "autobuild" ]]; then
-            echo "Expected build mode to be 'autobuild' but was $build_mode"
-            exit 1
-          fi
-
-      - uses: ./../action/analyze
-    env:
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__build-mode-manual.yml

@@ -1,76 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     (cd pr-checks; pip install ruamel.yaml@0.17.31 && python3 sync.py)
-# to regenerate this file.
-
-name: PR Check - Build mode manual
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request:
-    types:
-      - opened
-      - synchronize
-      - reopened
-      - ready_for_review
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch: {}
-jobs:
-  build-mode-manual:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: ubuntu-latest
-            version: nightly-latest
-    name: Build mode manual
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@v4
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - name: Install Go
-        uses: actions/setup-go@v5
-        with:
-          go-version: '>=1.21.0'
-          cache: false
-      - uses: ./../action/init
-        id: init
-        with:
-          build-mode: manual
-          db-location: ${{ runner.temp }}/customDbLocation
-          languages: java
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-
-      - name: Validate database build mode
-        run: |
-          metadata_path="$RUNNER_TEMP/customDbLocation/java/codeql-database.yml"
-          build_mode=$(yq eval '.buildMode' "$metadata_path")
-          if [[ "$build_mode" != "manual" ]]; then
-            echo "Expected build mode to be 'manual' but was $build_mode"
-            exit 1
-          fi
-
-      - name: Build code
-        shell: bash
-        run: ./build.sh
-
-      - uses: ./../action/analyze
-    env:
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__build-mode-none.yml

@@ -1,73 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     (cd pr-checks; pip install ruamel.yaml@0.17.31 && python3 sync.py)
-# to regenerate this file.
-
-name: PR Check - Build mode none
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request:
-    types:
-      - opened
-      - synchronize
-      - reopened
-      - ready_for_review
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch: {}
-jobs:
-  build-mode-none:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: ubuntu-latest
-            version: linked
-          - os: ubuntu-latest
-            version: nightly-latest
-    name: Build mode none
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@v4
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - uses: ./../action/init
-        id: init
-        with:
-          build-mode: none
-          db-location: ${{ runner.temp }}/customDbLocation
-          languages: java
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-
-      - name: Validate database build mode
-        run: |
-          metadata_path="$RUNNER_TEMP/customDbLocation/java/codeql-database.yml"
-          build_mode=$(yq eval '.buildMode' "$metadata_path")
-          if [[ "$build_mode" != "none" ]]; then
-            echo "Expected build mode to be 'none' but was $build_mode"
-            exit 1
-          fi
-
-  # The latest nightly supports omitting the autobuild Action when the build mode is specified.
-      - uses: ./../action/autobuild
-        if: matrix.version != 'nightly-latest'
-
-      - uses: ./../action/analyze
-    env:
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__build-mode-rollback.yml

@@ -1,74 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     (cd pr-checks; pip install ruamel.yaml@0.17.31 && python3 sync.py)
-# to regenerate this file.
-
-name: PR Check - Build mode rollback
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request:
-    types:
-      - opened
-      - synchronize
-      - reopened
-      - ready_for_review
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch: {}
-jobs:
-  build-mode-rollback:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: ubuntu-latest
-            version: nightly-latest
-    name: Build mode rollback
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@v4
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - name: Set up Java test repo configuration
-        run: |
-          mv * .github ../action/tests/multi-language-repo/
-          mv ../action/tests/multi-language-repo/.github/workflows .github
-          mv ../action/tests/java-repo/* .
-
-      - uses: ./../action/init
-        id: init
-        with:
-          build-mode: none
-          db-location: ${{ runner.temp }}/customDbLocation
-          languages: java
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-
-      - name: Validate database build mode
-        run: |
-          metadata_path="$RUNNER_TEMP/customDbLocation/java/codeql-database.yml"
-          build_mode=$(yq eval '.buildMode' "$metadata_path")
-          if [[ "$build_mode" != "autobuild" ]]; then
-            echo "Expected build mode to be 'autobuild' but was $build_mode"
-            exit 1
-          fi
-
-      - uses: ./../action/analyze
-    env:
-      CODEQL_ACTION_DISABLE_JAVA_BUILDLESS: true
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__cleanup-db-cluster-dir.yml

@@ -1,69 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     (cd pr-checks; pip install ruamel.yaml@0.17.31 && python3 sync.py)
-# to regenerate this file.
-
-name: PR Check - Clean up database cluster directory
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request:
-    types:
-      - opened
-      - synchronize
-      - reopened
-      - ready_for_review
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch: {}
-jobs:
-  cleanup-db-cluster-dir:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: ubuntu-latest
-            version: linked
-    name: Clean up database cluster directory
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@v4
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - name: Add a file to the database cluster directory
-        run: |
-          mkdir -p "${{ runner.temp }}/customDbLocation/javascript"
-          touch "${{ runner.temp }}/customDbLocation/javascript/a-file-to-clean-up.txt"
-
-      - uses: ./../action/init
-        id: init
-        with:
-          build-mode: none
-          db-location: ${{ runner.temp }}/customDbLocation
-          languages: javascript
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-
-      - name: Validate file cleaned up
-        run: |
-          if [[ -f "${{ runner.temp }}/customDbLocation/javascript/a-file-to-clean-up.txt" ]]; then
-            echo "File was not cleaned up"
-            exit 1
-          fi
-          echo "File was cleaned up"
-    env:
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__config-export.yml

@@ -7,94 +7,116 @@ name: PR Check - Config export
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
+  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-      - main
-      - releases/v*
+    - main
+    - releases/v*
   pull_request:
     types:
-      - opened
-      - synchronize
-      - reopened
-      - ready_for_review
-  schedule:
-    - cron: '0 5 * * *'
+    - opened
+    - synchronize
+    - reopened
+    - ready_for_review
   workflow_dispatch: {}
 jobs:
   config-export:
     strategy:
-      fail-fast: false
       matrix:
         include:
-          - os: ubuntu-latest
-            version: linked
-          - os: macos-latest
-            version: linked
-          - os: windows-latest
-            version: linked
-          - os: ubuntu-latest
-            version: nightly-latest
-          - os: macos-latest
-            version: nightly-latest
-          - os: windows-latest
-            version: nightly-latest
+        - os: ubuntu-latest
+          version: latest
+        - os: macos-latest
+          version: latest
+        - os: windows-latest
+          version: latest
+        - os: ubuntu-latest
+          version: nightly-latest
+        - os: macos-latest
+          version: nightly-latest
+        - os: windows-latest
+          version: nightly-latest
     name: Config export
     permissions:
       contents: read
-      security-events: read
+      security-events: write
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-      - name: Check out repository
-        uses: actions/checkout@v4
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - uses: ./../action/init
-        with:
-          languages: javascript
-          queries: security-extended
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-      - uses: ./../action/analyze
-        with:
-          output: ${{ runner.temp }}/results
-          upload-database: false
-      - name: Upload SARIF
-        uses: actions/upload-artifact@v4
-        with:
-          name: config-export-${{ matrix.os }}-${{ matrix.version }}.sarif.json
-          path: ${{ runner.temp }}/results/javascript.sarif
-          retention-days: 7
-      - name: Check config properties appear in SARIF
-        uses: actions/github-script@v7
-        env:
-          SARIF_PATH: ${{ runner.temp }}/results/javascript.sarif
-        with:
-          script: |
-            const fs = require('fs');
+    - name: Setup Python on MacOS
+      uses: actions/setup-python@v4
+      if: >-
+        matrix.os == 'macos-latest' && (
 
-            const sarif = JSON.parse(fs.readFileSync(process.env['SARIF_PATH'], 'utf8'));
-            const run = sarif.runs[0];
-            const configSummary = run.properties.codeqlConfigSummary;
+        matrix.version == 'stable-20220908' ||
 
-            if (configSummary === undefined) {
-              core.setFailed('`codeqlConfigSummary` property not found in the SARIF run property bag.');
-            }
-            if (configSummary.disableDefaultQueries !== false) {
-              core.setFailed('`disableDefaultQueries` property incorrect: expected false, got ' +
-                `${JSON.stringify(configSummary.disableDefaultQueries)}.`);
-            }
-            const expectedQueries = [{ type: 'builtinSuite', uses: 'security-extended' }];
-            // Use JSON.stringify to deep-equal the arrays.
-            if (JSON.stringify(configSummary.queries) !== JSON.stringify(expectedQueries)) {
-              core.setFailed(`\`queries\` property incorrect: expected ${JSON.stringify(expectedQueries)}, got ` +
-                `${JSON.stringify(configSummary.queries)}.`);
-            }
-            core.info('Finished config export tests.');
+        matrix.version == 'stable-20221211' ||
+
+        matrix.version == 'stable-20230418' ||
+
+        matrix.version == 'stable-v2.13.5' ||
+
+        matrix.version == 'stable-v2.14.6')
+      with:
+        python-version: '3.11'
+    - name: Check out repository
+      uses: actions/checkout@v4
+    - name: Prepare test
+      id: prepare-test
+      uses: ./.github/actions/prepare-test
+      with:
+        version: ${{ matrix.version }}
+        use-all-platform-bundle: 'false'
+    - name: Set environment variable for Swift enablement
+      if: >-
+        runner.os != 'Windows' && (
+            matrix.version == '20220908' ||
+            matrix.version == '20221211'
+        )
+      shell: bash
+      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
+    - uses: ./../action/init
+      with:
+        languages: javascript
+        queries: security-extended
+        tools: ${{ steps.prepare-test.outputs.tools-url }}
+    - uses: ./../action/analyze
+      with:
+        output: ${{ runner.temp }}/results
+        upload-database: false
+    - name: Upload SARIF
+      uses: actions/upload-artifact@v3
+      with:
+        name: config-export-${{ matrix.os }}-${{ matrix.version }}.sarif.json
+        path: ${{ runner.temp }}/results/javascript.sarif
+        retention-days: 7
+    - name: Check config properties appear in SARIF
+      uses: actions/github-script@v7
+      env:
+        SARIF_PATH: ${{ runner.temp }}/results/javascript.sarif
+      with:
+        script: |
+          const fs = require('fs');
+
+          const sarif = JSON.parse(fs.readFileSync(process.env['SARIF_PATH'], 'utf8'));
+          const run = sarif.runs[0];
+          const configSummary = run.properties.codeqlConfigSummary;
+
+          if (configSummary === undefined) {
+            core.setFailed('`codeqlConfigSummary` property not found in the SARIF run property bag.');
+          }
+          if (configSummary.disableDefaultQueries !== false) {
+            core.setFailed('`disableDefaultQueries` property incorrect: expected false, got ' + 
+              `${JSON.stringify(configSummary.disableDefaultQueries)}.`);
+          }
+          const expectedQueries = [{ type: 'builtinSuite', uses: 'security-extended' }];
+          // Use JSON.stringify to deep-equal the arrays.
+          if (JSON.stringify(configSummary.queries) !== JSON.stringify(expectedQueries)) {
+            core.setFailed(`\`queries\` property incorrect: expected ${JSON.stringify(expectedQueries)}, got ` + 
+              `${JSON.stringify(configSummary.queries)}.`);
+          }
+          core.info('Finished config export tests.');
     env:
+      CODEQL_PASS_CONFIG_TO_CLI: true
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__config-input.yml

@@ -1,77 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     (cd pr-checks; pip install ruamel.yaml@0.17.31 && python3 sync.py)
-# to regenerate this file.
-
-name: PR Check - Config input
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request:
-    types:
-      - opened
-      - synchronize
-      - reopened
-      - ready_for_review
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch: {}
-jobs:
-  config-input:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: ubuntu-latest
-            version: linked
-    name: Config input
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@v4
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - name: Copy queries into workspace
-        run: |
-          cp -a ../action/queries .
-
-      - uses: ./../action/init
-        with:
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-          languages: javascript
-          build-mode: none
-          config: |
-            disable-default-queries: true
-            queries:
-              - name: Run custom query
-                uses: ./queries/default-setup-environment-variables.ql
-            paths-ignore:
-              - tests
-              - lib
-
-      - uses: ./../action/analyze
-        with:
-          output: ${{ runner.temp }}/results
-
-      - name: Check SARIF
-        uses: ./../action/.github/actions/check-sarif
-        with:
-          sarif-file: ${{ runner.temp }}/results/javascript.sarif
-          queries-run: javascript/codeql-action/default-setup-env-vars
-          queries-not-run: javascript/codeql-action/default-setup-context-properties
-    env:
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__cpp-deptrace-disabled.yml

@@ -7,67 +7,88 @@ name: 'PR Check - C/C++: disabling autoinstalling dependencies (Linux)'
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
+  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-      - main
-      - releases/v*
+    - main
+    - releases/v*
   pull_request:
     types:
-      - opened
-      - synchronize
-      - reopened
-      - ready_for_review
-  schedule:
-    - cron: '0 5 * * *'
+    - opened
+    - synchronize
+    - reopened
+    - ready_for_review
   workflow_dispatch: {}
 jobs:
   cpp-deptrace-disabled:
     strategy:
-      fail-fast: false
       matrix:
         include:
-          - os: ubuntu-latest
-            version: linked
-          - os: ubuntu-latest
-            version: default
-          - os: ubuntu-latest
-            version: nightly-latest
+        - os: ubuntu-latest
+          version: latest
+        - os: ubuntu-latest
+          version: default
+        - os: ubuntu-latest
+          version: nightly-latest
     name: 'C/C++: disabling autoinstalling dependencies (Linux)'
     permissions:
       contents: read
-      security-events: read
+      security-events: write
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-      - name: Check out repository
-        uses: actions/checkout@v4
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - name: Test setup
-        shell: bash
-        run: |
-          cp -a ../action/tests/cpp-autobuild autobuild-dir
-      - uses: ./../action/init
-        with:
-          languages: cpp
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-      - uses: ./../action/autobuild
-        with:
-          working-directory: autobuild-dir
-        env:
-          CODEQL_EXTRACTOR_CPP_AUTOINSTALL_DEPENDENCIES: false
-      - shell: bash
-        run: |
-          if ls /usr/bin/errno; then
-            echo "C/C++ autobuild installed errno, but it should not have since auto-install dependencies is disabled."
-            exit 1
-          fi
+    - name: Setup Python on MacOS
+      uses: actions/setup-python@v4
+      if: >-
+        matrix.os == 'macos-latest' && (
+
+        matrix.version == 'stable-20220908' ||
+
+        matrix.version == 'stable-20221211' ||
+
+        matrix.version == 'stable-20230418' ||
+
+        matrix.version == 'stable-v2.13.5' ||
+
+        matrix.version == 'stable-v2.14.6')
+      with:
+        python-version: '3.11'
+    - name: Check out repository
+      uses: actions/checkout@v4
+    - name: Prepare test
+      id: prepare-test
+      uses: ./.github/actions/prepare-test
+      with:
+        version: ${{ matrix.version }}
+        use-all-platform-bundle: 'false'
+    - name: Set environment variable for Swift enablement
+      if: >-
+        runner.os != 'Windows' && (
+            matrix.version == '20220908' ||
+            matrix.version == '20221211'
+        )
+      shell: bash
+      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
+    - name: Test setup
+      shell: bash
+      run: |
+        cp -a ../action/tests/cpp-autobuild autobuild-dir
+    - uses: ./../action/init
+      with:
+        languages: cpp
+        tools: ${{ steps.prepare-test.outputs.tools-url }}
+    - uses: ./../action/autobuild
+      with:
+        working-directory: autobuild-dir
+      env:
+        CODEQL_EXTRACTOR_CPP_AUTOINSTALL_DEPENDENCIES: false
+    - shell: bash
+      run: |
+        if ls /usr/bin/errno; then
+          echo "C/C++ autobuild installed errno, but it should not have since auto-install dependencies is disabled."
+          exit 1
+        fi
     env:
       DOTNET_GENERATE_ASPNET_CERTIFICATE: 'false'
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__cpp-deptrace-enabled-on-macos.yml

@@ -7,67 +7,86 @@ name: 'PR Check - C/C++: autoinstalling dependencies is skipped (macOS)'
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
+  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-      - main
-      - releases/v*
+    - main
+    - releases/v*
   pull_request:
     types:
-      - opened
-      - synchronize
-      - reopened
-      - ready_for_review
-  schedule:
-    - cron: '0 5 * * *'
+    - opened
+    - synchronize
+    - reopened
+    - ready_for_review
   workflow_dispatch: {}
 jobs:
   cpp-deptrace-enabled-on-macos:
     strategy:
-      fail-fast: false
       matrix:
         include:
-          - os: macos-latest
-            version: linked
-          - os: macos-latest
-            version: nightly-latest
+        - os: macos-latest
+          version: nightly-latest
     name: 'C/C++: autoinstalling dependencies is skipped (macOS)'
     permissions:
       contents: read
-      security-events: read
+      security-events: write
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-      - name: Check out repository
-        uses: actions/checkout@v4
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - name: Test setup
-        shell: bash
-        run: |
-          cp -a ../action/tests/cpp-autobuild autobuild-dir
-      - uses: ./../action/init
-        with:
-          languages: cpp
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-      - uses: ./../action/autobuild
-        with:
-          working-directory: autobuild-dir
-        env:
-          CODEQL_EXTRACTOR_CPP_AUTOINSTALL_DEPENDENCIES: true
-      - shell: bash
-        run: |
-          if ! ls /usr/bin/errno; then
-            echo "As expected, CODEQL_EXTRACTOR_CPP_AUTOINSTALL_DEPENDENCIES is a no-op on macOS"
-          else
-            echo "CODEQL_EXTRACTOR_CPP_AUTOINSTALL_DEPENDENCIES should not have had any effect on macOS"
-            exit 1
-          fi
+    - name: Setup Python on MacOS
+      uses: actions/setup-python@v4
+      if: >-
+        matrix.os == 'macos-latest' && (
+
+        matrix.version == 'stable-20220908' ||
+
+        matrix.version == 'stable-20221211' ||
+
+        matrix.version == 'stable-20230418' ||
+
+        matrix.version == 'stable-v2.13.5' ||
+
+        matrix.version == 'stable-v2.14.6')
+      with:
+        python-version: '3.11'
+    - name: Check out repository
+      uses: actions/checkout@v4
+    - name: Prepare test
+      id: prepare-test
+      uses: ./.github/actions/prepare-test
+      with:
+        version: ${{ matrix.version }}
+        use-all-platform-bundle: 'false'
+    - name: Set environment variable for Swift enablement
+      if: >-
+        runner.os != 'Windows' && (
+            matrix.version == '20220908' ||
+            matrix.version == '20221211'
+        )
+      shell: bash
+      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
+    - name: Test setup
+      shell: bash
+      run: |
+        cp -a ../action/tests/cpp-autobuild autobuild-dir
+    - uses: ./../action/init
+      with:
+        languages: cpp
+        tools: ${{ steps.prepare-test.outputs.tools-url }}
+    - uses: ./../action/autobuild
+      with:
+        working-directory: autobuild-dir
+      env:
+        CODEQL_EXTRACTOR_CPP_AUTOINSTALL_DEPENDENCIES: true
+    - shell: bash
+      run: |
+        if ! ls /usr/bin/errno; then
+          echo "As expected, CODEQL_EXTRACTOR_CPP_AUTOINSTALL_DEPENDENCIES is a no-op on macOS"
+        else
+          echo "CODEQL_EXTRACTOR_CPP_AUTOINSTALL_DEPENDENCIES should not have had any effect on macOS"
+          exit 1
+        fi
     env:
       DOTNET_GENERATE_ASPNET_CERTIFICATE: 'false'
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__cpp-deptrace-enabled.yml

@@ -7,67 +7,88 @@ name: 'PR Check - C/C++: autoinstalling dependencies (Linux)'
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
+  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-      - main
-      - releases/v*
+    - main
+    - releases/v*
   pull_request:
     types:
-      - opened
-      - synchronize
-      - reopened
-      - ready_for_review
-  schedule:
-    - cron: '0 5 * * *'
+    - opened
+    - synchronize
+    - reopened
+    - ready_for_review
   workflow_dispatch: {}
 jobs:
   cpp-deptrace-enabled:
     strategy:
-      fail-fast: false
       matrix:
         include:
-          - os: ubuntu-latest
-            version: linked
-          - os: ubuntu-latest
-            version: default
-          - os: ubuntu-latest
-            version: nightly-latest
+        - os: ubuntu-latest
+          version: latest
+        - os: ubuntu-latest
+          version: default
+        - os: ubuntu-latest
+          version: nightly-latest
     name: 'C/C++: autoinstalling dependencies (Linux)'
     permissions:
       contents: read
-      security-events: read
+      security-events: write
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-      - name: Check out repository
-        uses: actions/checkout@v4
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - name: Test setup
-        shell: bash
-        run: |
-          cp -a ../action/tests/cpp-autobuild autobuild-dir
-      - uses: ./../action/init
-        with:
-          languages: cpp
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-      - uses: ./../action/autobuild
-        with:
-          working-directory: autobuild-dir
-        env:
-          CODEQL_EXTRACTOR_CPP_AUTOINSTALL_DEPENDENCIES: true
-      - shell: bash
-        run: |
-          if ! ls /usr/bin/errno; then
-            echo "Did not autoinstall errno"
-            exit 1
-          fi
+    - name: Setup Python on MacOS
+      uses: actions/setup-python@v4
+      if: >-
+        matrix.os == 'macos-latest' && (
+
+        matrix.version == 'stable-20220908' ||
+
+        matrix.version == 'stable-20221211' ||
+
+        matrix.version == 'stable-20230418' ||
+
+        matrix.version == 'stable-v2.13.5' ||
+
+        matrix.version == 'stable-v2.14.6')
+      with:
+        python-version: '3.11'
+    - name: Check out repository
+      uses: actions/checkout@v4
+    - name: Prepare test
+      id: prepare-test
+      uses: ./.github/actions/prepare-test
+      with:
+        version: ${{ matrix.version }}
+        use-all-platform-bundle: 'false'
+    - name: Set environment variable for Swift enablement
+      if: >-
+        runner.os != 'Windows' && (
+            matrix.version == '20220908' ||
+            matrix.version == '20221211'
+        )
+      shell: bash
+      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
+    - name: Test setup
+      shell: bash
+      run: |
+        cp -a ../action/tests/cpp-autobuild autobuild-dir
+    - uses: ./../action/init
+      with:
+        languages: cpp
+        tools: ${{ steps.prepare-test.outputs.tools-url }}
+    - uses: ./../action/autobuild
+      with:
+        working-directory: autobuild-dir
+      env:
+        CODEQL_EXTRACTOR_CPP_AUTOINSTALL_DEPENDENCIES: true
+    - shell: bash
+      run: |
+        if ! ls /usr/bin/errno; then
+          echo "Did not autoinstall errno"
+          exit 1
+        fi
     env:
       DOTNET_GENERATE_ASPNET_CERTIFICATE: 'false'
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__diagnostics-export.yml

@@ -7,131 +7,162 @@ name: PR Check - Diagnostic export
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
+  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-      - main
-      - releases/v*
+    - main
+    - releases/v*
   pull_request:
     types:
-      - opened
-      - synchronize
-      - reopened
-      - ready_for_review
-  schedule:
-    - cron: '0 5 * * *'
+    - opened
+    - synchronize
+    - reopened
+    - ready_for_review
   workflow_dispatch: {}
 jobs:
   diagnostics-export:
     strategy:
-      fail-fast: false
       matrix:
         include:
-          - os: ubuntu-latest
-            version: linked
-          - os: macos-latest
-            version: linked
-          - os: windows-latest
-            version: linked
-          - os: ubuntu-latest
-            version: nightly-latest
-          - os: macos-latest
-            version: nightly-latest
-          - os: windows-latest
-            version: nightly-latest
+        - os: ubuntu-latest
+          version: stable-20230317
+        - os: macos-latest
+          version: stable-20230317
+        - os: windows-latest
+          version: stable-20230317
+        - os: ubuntu-latest
+          version: latest
+        - os: macos-latest
+          version: latest
+        - os: windows-latest
+          version: latest
+        - os: ubuntu-latest
+          version: nightly-latest
+        - os: macos-latest
+          version: nightly-latest
+        - os: windows-latest
+          version: nightly-latest
     name: Diagnostic export
     permissions:
       contents: read
-      security-events: read
+      security-events: write
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-      - name: Check out repository
-        uses: actions/checkout@v4
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - uses: ./../action/init
-        id: init
-        with:
-          languages: javascript
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-      - name: Add test diagnostics
-        shell: bash
-        env:
-          CODEQL_PATH: ${{ steps.init.outputs.codeql-path }}
-        run: |
+    - name: Setup Python on MacOS
+      uses: actions/setup-python@v4
+      if: >-
+        matrix.os == 'macos-latest' && (
+
+        matrix.version == 'stable-20220908' ||
+
+        matrix.version == 'stable-20221211' ||
+
+        matrix.version == 'stable-20230418' ||
+
+        matrix.version == 'stable-v2.13.5' ||
+
+        matrix.version == 'stable-v2.14.6')
+      with:
+        python-version: '3.11'
+    - name: Check out repository
+      uses: actions/checkout@v4
+    - name: Prepare test
+      id: prepare-test
+      uses: ./.github/actions/prepare-test
+      with:
+        version: ${{ matrix.version }}
+        use-all-platform-bundle: 'false'
+    - name: Set environment variable for Swift enablement
+      if: >-
+        runner.os != 'Windows' && (
+            matrix.version == '20220908' ||
+            matrix.version == '20221211'
+        )
+      shell: bash
+      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
+    - uses: ./../action/init
+      id: init
+      with:
+        languages: javascript
+        tools: ${{ steps.prepare-test.outputs.tools-url }}
+    - name: Add test diagnostics
+      shell: bash
+      env:
+        CODEQL_PATH: ${{ steps.init.outputs.codeql-path }}
+      run: |
+        for i in {1..2}; do
+          # Use the same location twice to test the workaround for the bug in CodeQL CLI 2.12.5 that
+          # produces an invalid diagnostic with multiple identical location objects.
           "$CODEQL_PATH" database add-diagnostic \
             "$RUNNER_TEMP/codeql_databases/javascript" \
             --file-path /path/to/file \
-            --plaintext-message "Plaintext message" \
+            --plaintext-message "Plaintext message $i" \
             --source-id "lang/diagnostics/example" \
             --source-name "Diagnostic name" \
             --ready-for-status-page
-      - uses: ./../action/analyze
-        with:
-          output: ${{ runner.temp }}/results
-          upload-database: false
-      - name: Upload SARIF
-        uses: actions/upload-artifact@v4
-        with:
-          name: diagnostics-export-${{ matrix.os }}-${{ matrix.version }}.sarif.json
-          path: ${{ runner.temp }}/results/javascript.sarif
-          retention-days: 7
-      - name: Check diagnostics appear in SARIF
-        uses: actions/github-script@v7
-        env:
-          SARIF_PATH: ${{ runner.temp }}/results/javascript.sarif
-        with:
-          script: |
-            const fs = require('fs');
+        done
+    - uses: ./../action/analyze
+      with:
+        output: ${{ runner.temp }}/results
+        upload-database: false
+    - name: Upload SARIF
+      uses: actions/upload-artifact@v3
+      with:
+        name: diagnostics-export-${{ matrix.os }}-${{ matrix.version }}.sarif.json
+        path: ${{ runner.temp }}/results/javascript.sarif
+        retention-days: 7
+    - name: Check diagnostics appear in SARIF
+      uses: actions/github-script@v7
+      env:
+        SARIF_PATH: ${{ runner.temp }}/results/javascript.sarif
+      with:
+        script: |
+          const fs = require('fs');
 
-            function checkStatusPageNotification(n) {
-              const expectedMessage = 'Plaintext message';
-              if (n.message.text !== expectedMessage) {
-                core.setFailed(`Expected the status page diagnostic to have the message '${expectedMessage}', but found '${n.message.text}'.`);
-              }
-              if (n.locations.length !== 1) {
-                core.setFailed(`Expected the status page diagnostic to have exactly 1 location, but found ${n.locations.length}.`);
-              }
+          function checkStatusPageNotification(n) {
+            const expectedMessage = 'Plaintext message 1\n\nCodeQL also found 1 other diagnostic like this. See the workflow log for details.';
+            if (n.message.text !== expectedMessage) {
+              core.setFailed(`Expected the status page diagnostic to have the message '${expectedMessage}', but found '${n.message.text}'.`);
             }
+            if (n.locations.length !== 1) {
+              core.setFailed(`Expected the status page diagnostic to have exactly 1 location, but found ${n.locations.length}.`);
+            }
+          }
 
-            const sarif = JSON.parse(fs.readFileSync(process.env['SARIF_PATH'], 'utf8'));
-            const run = sarif.runs[0];
+          const sarif = JSON.parse(fs.readFileSync(process.env['SARIF_PATH'], 'utf8'));
+          const run = sarif.runs[0];
 
-            const toolExecutionNotifications = run.invocations[0].toolExecutionNotifications;
-            const statusPageNotifications = toolExecutionNotifications.filter(n =>
-              n.descriptor.id === 'lang/diagnostics/example' && n.properties?.visibility?.statusPage
+          const toolExecutionNotifications = run.invocations[0].toolExecutionNotifications;
+          const statusPageNotifications = toolExecutionNotifications.filter(n =>
+            n.descriptor.id === 'lang/diagnostics/example' && n.properties?.visibility?.statusPage
+          );
+          if (statusPageNotifications.length !== 1) {
+            core.setFailed(
+              'Expected exactly one status page reporting descriptor for this diagnostic in the ' +
+                `'runs[].invocations[].toolExecutionNotifications[]' SARIF property, but found ` +
+                `${statusPageNotifications.length}. All notification reporting descriptors: ` + 
+                `${JSON.stringify(toolExecutionNotifications)}.`
             );
-            if (statusPageNotifications.length !== 1) {
-              core.setFailed(
-                'Expected exactly one status page reporting descriptor for this diagnostic in the ' +
-                  `'runs[].invocations[].toolExecutionNotifications[]' SARIF property, but found ` +
-                  `${statusPageNotifications.length}. All notification reporting descriptors: ` +
-                  `${JSON.stringify(toolExecutionNotifications)}.`
-              );
-            }
-            checkStatusPageNotification(statusPageNotifications[0]);
+          }
+          checkStatusPageNotification(statusPageNotifications[0]);
 
-            const notifications = run.tool.driver.notifications;
-            const diagnosticNotification = notifications.filter(n =>
-              n.id === 'lang/diagnostics/example' && n.name === 'lang/diagnostics/example' &&
-                n.fullDescription.text === 'Diagnostic name'
+          const notifications = run.tool.driver.notifications;
+          const diagnosticNotification = notifications.filter(n =>
+            n.id === 'lang/diagnostics/example' && n.name === 'lang/diagnostics/example' &&
+              n.fullDescription.text === 'Diagnostic name'
+          );
+          if (diagnosticNotification.length !== 1) {
+            core.setFailed(
+              'Expected exactly one notification for this diagnostic in the ' +
+                `'runs[].tool.driver.notifications[]' SARIF property, but found ` +
+                `${diagnosticNotification.length}. All notifications: ` +
+                `${JSON.stringify(notifications)}.`
             );
-            if (diagnosticNotification.length !== 1) {
-              core.setFailed(
-                'Expected exactly one notification for this diagnostic in the ' +
-                  `'runs[].tool.driver.notifications[]' SARIF property, but found ` +
-                  `${diagnosticNotification.length}. All notifications: ` +
-                  `${JSON.stringify(notifications)}.`
-              );
-            }
+          }
 
-            core.info('Finished diagnostic export test');
+          core.info('Finished diagnostic export test');
     env:
       CODEQL_ACTION_EXPORT_DIAGNOSTICS: true
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__export-file-baseline-information.yml

@@ -7,94 +7,109 @@ name: PR Check - Export file baseline information
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
+  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-      - main
-      - releases/v*
+    - main
+    - releases/v*
   pull_request:
     types:
-      - opened
-      - synchronize
-      - reopened
-      - ready_for_review
-  schedule:
-    - cron: '0 5 * * *'
+    - opened
+    - synchronize
+    - reopened
+    - ready_for_review
   workflow_dispatch: {}
 jobs:
   export-file-baseline-information:
     strategy:
-      fail-fast: false
       matrix:
         include:
-          - os: ubuntu-latest
-            version: nightly-latest
-          - os: macos-latest
-            version: nightly-latest
-          - os: windows-latest
-            version: nightly-latest
+        - os: ubuntu-latest
+          version: nightly-latest
+        - os: macos-latest
+          version: nightly-latest
+        - os: windows-latest
+          version: nightly-latest
     name: Export file baseline information
     permissions:
       contents: read
-      security-events: read
+      security-events: write
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-      - name: Check out repository
-        uses: actions/checkout@v4
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - name: Install Go
-        uses: actions/setup-go@v5
-        with:
-          go-version: '>=1.21.0'
-          cache: false
-      - uses: ./../action/init
-        id: init
-        with:
-          languages: javascript
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-      - uses: ./../action/.github/actions/setup-swift
-        if: runner.os == 'macOS'
-        with:
-          codeql-path: ${{ steps.init.outputs.codeql-path }}
-      - name: Build code
-        shell: bash
-        run: ./build.sh
-      - uses: ./../action/analyze
-        with:
-          output: ${{ runner.temp }}/results
-      - name: Upload SARIF
-        uses: actions/upload-artifact@v4
-        with:
-          name: with-baseline-information-${{ matrix.os }}-${{ matrix.version }}.sarif.json
-          path: ${{ runner.temp }}/results/javascript.sarif
-          retention-days: 7
-      - name: Check results
-        shell: bash
-        run: |
-          cd "$RUNNER_TEMP/results"
-          expected_baseline_languages="c csharp go java kotlin javascript python ruby"
-          if [[ $RUNNER_OS == "macOS" ]]; then
-            expected_baseline_languages+=" swift"
-          fi
+    - name: Setup Python on MacOS
+      uses: actions/setup-python@v4
+      if: >-
+        matrix.os == 'macos-latest' && (
 
-          for lang in ${expected_baseline_languages}; do
-            rule_name="cli/expected-extracted-files/${lang}"
-            found_notification=$(jq --arg rule_name "${rule_name}" '[.runs[0].tool.driver.notifications |
-              select(. != null) | flatten | .[].id] | any(. == $rule_name)' javascript.sarif)
-            if [[ "${found_notification}" != "true" ]]; then
-              echo "Expected SARIF output to contain notification '${rule_name}', but found no such notification."
-              exit 1
-            else
-              echo "Found notification '${rule_name}'."
-            fi
-          done
+        matrix.version == 'stable-20220908' ||
+
+        matrix.version == 'stable-20221211' ||
+
+        matrix.version == 'stable-20230418' ||
+
+        matrix.version == 'stable-v2.13.5' ||
+
+        matrix.version == 'stable-v2.14.6')
+      with:
+        python-version: '3.11'
+    - name: Check out repository
+      uses: actions/checkout@v4
+    - name: Prepare test
+      id: prepare-test
+      uses: ./.github/actions/prepare-test
+      with:
+        version: ${{ matrix.version }}
+        use-all-platform-bundle: 'false'
+    - name: Set environment variable for Swift enablement
+      if: >-
+        runner.os != 'Windows' && (
+            matrix.version == '20220908' ||
+            matrix.version == '20221211'
+        )
+      shell: bash
+      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
+    - uses: ./../action/init
+      id: init
+      with:
+        languages: javascript
+        tools: ${{ steps.prepare-test.outputs.tools-url }}
+    - uses: ./../action/.github/actions/setup-swift
+      with:
+        codeql-path: ${{ steps.init.outputs.codeql-path }}
+    - name: Build code
+      shell: bash
+      run: ./build.sh
+    - uses: ./../action/analyze
+      with:
+        output: ${{ runner.temp }}/results
+    - name: Upload SARIF
+      uses: actions/upload-artifact@v3
+      with:
+        name: with-baseline-information-${{ matrix.os }}-${{ matrix.version }}.sarif.json
+        path: ${{ runner.temp }}/results/javascript.sarif
+        retention-days: 7
+    - name: Check results
+      shell: bash
+      run: |
+        cd "$RUNNER_TEMP/results"
+        expected_baseline_languages="c csharp go java kotlin javascript python ruby"
+        if [[ $RUNNER_OS != "Windows" ]]; then
+          expected_baseline_languages+=" swift"
+        fi
+
+        for lang in ${expected_baseline_languages}; do
+          rule_name="cli/expected-extracted-files/${lang}"
+          found_notification=$(jq --arg rule_name "${rule_name}" '[.runs[0].tool.driver.notifications |
+            select(. != null) | flatten | .[].id] | any(. == $rule_name)' javascript.sarif)
+          if [[ "${found_notification}" != "true" ]]; then
+            echo "Expected SARIF output to contain notification '${rule_name}', but found no such notification."
+            exit 1
+          else
+            echo "Found notification '${rule_name}'."
+          fi
+        done
     env:
       CODEQL_ACTION_SUBLANGUAGE_FILE_COVERAGE: true
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__extract-direct-to-toolcache.yml

@@ -1,96 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     (cd pr-checks; pip install ruamel.yaml@0.17.31 && python3 sync.py)
-# to regenerate this file.
-
-name: PR Check - Extract directly to toolcache
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request:
-    types:
-      - opened
-      - synchronize
-      - reopened
-      - ready_for_review
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch: {}
-jobs:
-  extract-direct-to-toolcache:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: macos-latest
-            version: linked
-          - os: ubuntu-latest
-            version: linked
-          - os: windows-latest
-            version: linked
-    name: Extract directly to toolcache
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@v4
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - name: Remove CodeQL from toolcache
-        uses: actions/github-script@v7
-        with:
-          script: |
-            const fs = require('fs');
-            const path = require('path');
-            const codeqlPath = path.join(process.env['RUNNER_TOOL_CACHE'], 'CodeQL');
-            fs.rmdirSync(codeqlPath, { recursive: true });
-      - name: Install @actions/tool-cache
-        run: npm install @actions/tool-cache
-      - name: Check toolcache does not contain CodeQL
-        uses: actions/github-script@v7
-        with:
-          script: |
-            const toolcache = require('@actions/tool-cache');
-            const allCodeqlVersions = toolcache.findAllVersions('CodeQL');
-            if (allCodeqlVersions.length !== 0) {
-              throw new Error(`CodeQL should not be found in the toolcache, but found ${allCodeqlVersions}`);
-            }
-            console.log('No versions of CodeQL found in the toolcache');
-      - id: init
-        uses: ./../action/init
-        with:
-          languages: javascript
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-      - uses: ./../action/analyze
-        with:
-          output: ${{ runner.temp }}/results
-          upload-database: false
-      - name: Check CodeQL is installed within the toolcache
-        uses: actions/github-script@v7
-        with:
-          script: |
-            const toolcache = require('@actions/tool-cache');
-            const allCodeqlVersions = toolcache.findAllVersions('CodeQL');
-            console.log(`Found CodeQL versions: ${allCodeqlVersions}`);
-            if (allCodeqlVersions.length === 0) {
-              throw new Error('CodeQL not found in toolcache');
-            }
-            if (allCodeqlVersions.length > 1) {
-              throw new Error('Multiple CodeQL versions found in toolcache');
-            }
-    env:
-      CODEQL_ACTION_EXTRACT_TOOLCACHE: true
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__extractor-ram-threads.yml

@@ -7,67 +7,88 @@ name: PR Check - Extractor ram and threads options test
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
+  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-      - main
-      - releases/v*
+    - main
+    - releases/v*
   pull_request:
     types:
-      - opened
-      - synchronize
-      - reopened
-      - ready_for_review
-  schedule:
-    - cron: '0 5 * * *'
+    - opened
+    - synchronize
+    - reopened
+    - ready_for_review
   workflow_dispatch: {}
 jobs:
   extractor-ram-threads:
     strategy:
-      fail-fast: false
       matrix:
         include:
-          - os: ubuntu-latest
-            version: linked
+        - os: ubuntu-latest
+          version: latest
     name: Extractor ram and threads options test
     permissions:
       contents: read
-      security-events: read
+      security-events: write
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-      - name: Check out repository
-        uses: actions/checkout@v4
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - uses: ./../action/init
-        with:
-          languages: java
-          ram: 230
-          threads: 1
-      - name: Assert Results
-        shell: bash
-        run: |
-          if [ "${CODEQL_RAM}" != "230" ]; then
-            echo "CODEQL_RAM is '${CODEQL_RAM}' instead of 230"
-            exit 1
-          fi
-          if [ "${CODEQL_EXTRACTOR_JAVA_RAM}" != "230" ]; then
-            echo "CODEQL_EXTRACTOR_JAVA_RAM is '${CODEQL_EXTRACTOR_JAVA_RAM}' instead of 230"
-            exit 1
-          fi
-          if [ "${CODEQL_THREADS}" != "1" ]; then
-            echo "CODEQL_THREADS is '${CODEQL_THREADS}' instead of 1"
-            exit 1
-          fi
-          if [ "${CODEQL_EXTRACTOR_JAVA_THREADS}" != "1" ]; then
-            echo "CODEQL_EXTRACTOR_JAVA_THREADS is '${CODEQL_EXTRACTOR_JAVA_THREADS}' instead of 1"
-            exit 1
-          fi
+    - name: Setup Python on MacOS
+      uses: actions/setup-python@v4
+      if: >-
+        matrix.os == 'macos-latest' && (
+
+        matrix.version == 'stable-20220908' ||
+
+        matrix.version == 'stable-20221211' ||
+
+        matrix.version == 'stable-20230418' ||
+
+        matrix.version == 'stable-v2.13.5' ||
+
+        matrix.version == 'stable-v2.14.6')
+      with:
+        python-version: '3.11'
+    - name: Check out repository
+      uses: actions/checkout@v4
+    - name: Prepare test
+      id: prepare-test
+      uses: ./.github/actions/prepare-test
+      with:
+        version: ${{ matrix.version }}
+        use-all-platform-bundle: 'false'
+    - name: Set environment variable for Swift enablement
+      if: >-
+        runner.os != 'Windows' && (
+            matrix.version == '20220908' ||
+            matrix.version == '20221211'
+        )
+      shell: bash
+      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
+    - uses: ./../action/init
+      with:
+        languages: java
+        ram: 230
+        threads: 1
+    - name: Assert Results
+      shell: bash
+      run: |
+        if [ "${CODEQL_RAM}" != "230" ]; then
+          echo "CODEQL_RAM is '${CODEQL_RAM}' instead of 230"
+          exit 1
+        fi
+        if [ "${CODEQL_EXTRACTOR_JAVA_RAM}" != "230" ]; then
+          echo "CODEQL_EXTRACTOR_JAVA_RAM is '${CODEQL_EXTRACTOR_JAVA_RAM}' instead of 230"
+          exit 1
+        fi
+        if [ "${CODEQL_THREADS}" != "1" ]; then
+          echo "CODEQL_THREADS is '${CODEQL_THREADS}' instead of 1"
+          exit 1
+        fi
+        if [ "${CODEQL_EXTRACTOR_JAVA_THREADS}" != "1" ]; then
+          echo "CODEQL_EXTRACTOR_JAVA_THREADS is '${CODEQL_EXTRACTOR_JAVA_THREADS}' instead of 1"
+          exit 1
+        fi
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__go-custom-queries.yml

@@ -7,60 +7,122 @@ name: 'PR Check - Go: Custom queries'
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
+  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-      - main
-      - releases/v*
+    - main
+    - releases/v*
   pull_request:
     types:
-      - opened
-      - synchronize
-      - reopened
-      - ready_for_review
-  schedule:
-    - cron: '0 5 * * *'
+    - opened
+    - synchronize
+    - reopened
+    - ready_for_review
   workflow_dispatch: {}
 jobs:
   go-custom-queries:
     strategy:
-      fail-fast: false
       matrix:
         include:
-          - os: ubuntu-latest
-            version: linked
-          - os: ubuntu-latest
-            version: nightly-latest
+        - os: ubuntu-latest
+          version: stable-20220908
+        - os: macos-latest
+          version: stable-20220908
+        - os: windows-latest
+          version: stable-20220908
+        - os: ubuntu-latest
+          version: stable-20221211
+        - os: macos-latest
+          version: stable-20221211
+        - os: windows-latest
+          version: stable-20221211
+        - os: ubuntu-latest
+          version: stable-20230418
+        - os: macos-latest
+          version: stable-20230418
+        - os: windows-latest
+          version: stable-20230418
+        - os: ubuntu-latest
+          version: stable-v2.13.5
+        - os: macos-latest
+          version: stable-v2.13.5
+        - os: windows-latest
+          version: stable-v2.13.5
+        - os: ubuntu-latest
+          version: stable-v2.14.6
+        - os: macos-latest
+          version: stable-v2.14.6
+        - os: windows-latest
+          version: stable-v2.14.6
+        - os: ubuntu-latest
+          version: default
+        - os: macos-latest
+          version: default
+        - os: windows-latest
+          version: default
+        - os: ubuntu-latest
+          version: latest
+        - os: macos-latest
+          version: latest
+        - os: windows-latest
+          version: latest
+        - os: ubuntu-latest
+          version: nightly-latest
+        - os: macos-latest
+          version: nightly-latest
+        - os: windows-latest
+          version: nightly-latest
     name: 'Go: Custom queries'
     permissions:
       contents: read
-      security-events: read
+      security-events: write
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-      - name: Check out repository
-        uses: actions/checkout@v4
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - name: Install Go
-        uses: actions/setup-go@v5
-        with:
-          go-version: '>=1.21.0'
-          cache: false
-      - uses: ./../action/init
-        with:
-          languages: go
-          config-file: ./.github/codeql/custom-queries.yml
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-      - name: Build code
-        shell: bash
-        run: ./build.sh
-      - uses: ./../action/analyze
+    - name: Setup Python on MacOS
+      uses: actions/setup-python@v4
+      if: >-
+        matrix.os == 'macos-latest' && (
+
+        matrix.version == 'stable-20220908' ||
+
+        matrix.version == 'stable-20221211' ||
+
+        matrix.version == 'stable-20230418' ||
+
+        matrix.version == 'stable-v2.13.5' ||
+
+        matrix.version == 'stable-v2.14.6')
+      with:
+        python-version: '3.11'
+    - name: Check out repository
+      uses: actions/checkout@v4
+    - name: Prepare test
+      id: prepare-test
+      uses: ./.github/actions/prepare-test
+      with:
+        version: ${{ matrix.version }}
+        use-all-platform-bundle: 'false'
+    - name: Set environment variable for Swift enablement
+      if: >-
+        runner.os != 'Windows' && (
+            matrix.version == '20220908' ||
+            matrix.version == '20221211'
+        )
+      shell: bash
+      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
+    - uses: ./../action/init
+      with:
+        languages: go
+        config-file: ./.github/codeql/custom-queries.yml
+        tools: ${{ steps.prepare-test.outputs.tools-url }}
+    - name: Build code
+      shell: bash
+      run: ./build.sh
+    - uses: ./../action/analyze
+      with:
+        upload-database: false
     env:
       DOTNET_GENERATE_ASPNET_CERTIFICATE: 'false'
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__go-indirect-tracing-workaround-diagnostic.yml

@@ -7,86 +7,106 @@ name: 'PR Check - Go: diagnostic when Go is changed after init step'
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
+  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-      - main
-      - releases/v*
+    - main
+    - releases/v*
   pull_request:
     types:
-      - opened
-      - synchronize
-      - reopened
-      - ready_for_review
-  schedule:
-    - cron: '0 5 * * *'
+    - opened
+    - synchronize
+    - reopened
+    - ready_for_review
   workflow_dispatch: {}
 jobs:
   go-indirect-tracing-workaround-diagnostic:
     strategy:
-      fail-fast: false
       matrix:
         include:
-          - os: ubuntu-latest
-            version: default
+        - os: ubuntu-latest
+          version: stable-v2.14.6
     name: 'Go: diagnostic when Go is changed after init step'
     permissions:
       contents: read
-      security-events: read
+      security-events: write
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-      - name: Check out repository
-        uses: actions/checkout@v4
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - name: Install Go
-        uses: actions/setup-go@v5
-        with:
-          go-version: '>=1.21.0'
-          cache: false
-      - uses: ./../action/init
-        with:
-          languages: go
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
+    - name: Setup Python on MacOS
+      uses: actions/setup-python@v4
+      if: >-
+        matrix.os == 'macos-latest' && (
+
+        matrix.version == 'stable-20220908' ||
+
+        matrix.version == 'stable-20221211' ||
+
+        matrix.version == 'stable-20230418' ||
+
+        matrix.version == 'stable-v2.13.5' ||
+
+        matrix.version == 'stable-v2.14.6')
+      with:
+        python-version: '3.11'
+    - name: Check out repository
+      uses: actions/checkout@v4
+    - name: Prepare test
+      id: prepare-test
+      uses: ./.github/actions/prepare-test
+      with:
+        version: ${{ matrix.version }}
+        use-all-platform-bundle: 'false'
+    - name: Set environment variable for Swift enablement
+      if: >-
+        runner.os != 'Windows' && (
+            matrix.version == '20220908' ||
+            matrix.version == '20221211'
+        )
+      shell: bash
+      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
+    - uses: actions/setup-go@v4
+      with:
+      # We need a Go version that ships with statically linked binaries on Linux
+        go-version: '>=1.21.0'
+    - uses: ./../action/init
+      with:
+        languages: go
+        tools: ${{ steps.prepare-test.outputs.tools-url }}
   # Deliberately change Go after the `init` step
-      - uses: actions/setup-go@v5
-        with:
-          go-version: '1.20'
-      - name: Build code
-        shell: bash
-        run: go build main.go
-      - uses: ./../action/analyze
-        with:
-          output: ${{ runner.temp }}/results
-          upload-database: false
-      - name: Check diagnostic appears in SARIF
-        uses: actions/github-script@v7
-        env:
-          SARIF_PATH: ${{ runner.temp }}/results/go.sarif
-        with:
-          script: |
-            const fs = require('fs');
+    - uses: actions/setup-go@v4
+      with:
+        go-version: '1.20'
+    - name: Build code
+      shell: bash
+      run: go build main.go
+    - uses: ./../action/analyze
+      with:
+        output: ${{ runner.temp }}/results
+        upload-database: false
+    - name: Check diagnostic appears in SARIF
+      uses: actions/github-script@v7
+      env:
+        SARIF_PATH: ${{ runner.temp }}/results/go.sarif
+      with:
+        script: |
+          const fs = require('fs');
 
-            const sarif = JSON.parse(fs.readFileSync(process.env['SARIF_PATH'], 'utf8'));
-            const run = sarif.runs[0];
+          const sarif = JSON.parse(fs.readFileSync(process.env['SARIF_PATH'], 'utf8'));
+          const run = sarif.runs[0];
 
-            const toolExecutionNotifications = run.invocations[0].toolExecutionNotifications;
-            const statusPageNotifications = toolExecutionNotifications.filter(n =>
-              n.descriptor.id === 'go/workflow/go-installed-after-codeql-init' && n.properties?.visibility?.statusPage
+          const toolExecutionNotifications = run.invocations[0].toolExecutionNotifications;
+          const statusPageNotifications = toolExecutionNotifications.filter(n =>
+            n.descriptor.id === 'go/workflow/go-installed-after-codeql-init' && n.properties?.visibility?.statusPage
+          );
+          if (statusPageNotifications.length !== 1) {
+            core.setFailed(
+              'Expected exactly one status page reporting descriptor for this diagnostic in the ' +
+                `'runs[].invocations[].toolExecutionNotifications[]' SARIF property, but found ` +
+                `${statusPageNotifications.length}. All notification reporting descriptors: ` +
+                `${JSON.stringify(toolExecutionNotifications)}.`
             );
-            if (statusPageNotifications.length !== 1) {
-              core.setFailed(
-                'Expected exactly one status page reporting descriptor for this diagnostic in the ' +
-                  `'runs[].invocations[].toolExecutionNotifications[]' SARIF property, but found ` +
-                  `${statusPageNotifications.length}. All notification reporting descriptors: ` +
-                  `${JSON.stringify(toolExecutionNotifications)}.`
-              );
-            }
+          }
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__go-indirect-tracing-workaround-no-file-program.yml

@@ -1,93 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     (cd pr-checks; pip install ruamel.yaml@0.17.31 && python3 sync.py)
-# to regenerate this file.
-
-name: 'PR Check - Go: diagnostic when `file` is not installed'
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request:
-    types:
-      - opened
-      - synchronize
-      - reopened
-      - ready_for_review
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch: {}
-jobs:
-  go-indirect-tracing-workaround-no-file-program:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: ubuntu-latest
-            version: default
-    name: 'Go: diagnostic when `file` is not installed'
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@v4
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - name: Install Go
-        uses: actions/setup-go@v5
-        with:
-          go-version: '>=1.21.0'
-          cache: false
-      - name: Remove `file` program
-        run: |
-          echo $(which file)
-          sudo rm -rf $(which file)
-          echo $(which file)
-      - uses: ./../action/init
-        with:
-          languages: go
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-      - name: Build code
-        shell: bash
-        run: go build main.go
-      - uses: ./../action/analyze
-        with:
-          output: ${{ runner.temp }}/results
-          upload-database: false
-      - name: Check diagnostic appears in SARIF
-        uses: actions/github-script@v7
-        env:
-          SARIF_PATH: ${{ runner.temp }}/results/go.sarif
-        with:
-          script: |
-            const fs = require('fs');
-
-            const sarif = JSON.parse(fs.readFileSync(process.env['SARIF_PATH'], 'utf8'));
-            const run = sarif.runs[0];
-
-            const toolExecutionNotifications = run.invocations[0].toolExecutionNotifications;
-            const statusPageNotifications = toolExecutionNotifications.filter(n =>
-              n.descriptor.id === 'go/workflow/file-program-unavailable' && n.properties?.visibility?.statusPage
-            );
-            if (statusPageNotifications.length !== 1) {
-              core.setFailed(
-                'Expected exactly one status page reporting descriptor for this diagnostic in the ' +
-                  `'runs[].invocations[].toolExecutionNotifications[]' SARIF property, but found ` +
-                  `${statusPageNotifications.length}. All notification reporting descriptors: ` +
-                  `${JSON.stringify(toolExecutionNotifications)}.`
-              );
-            }
-    env:
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__go-indirect-tracing-workaround.yml

@@ -7,82 +7,104 @@ name: 'PR Check - Go: workaround for indirect tracing'
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
+  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-      - main
-      - releases/v*
+    - main
+    - releases/v*
   pull_request:
     types:
-      - opened
-      - synchronize
-      - reopened
-      - ready_for_review
-  schedule:
-    - cron: '0 5 * * *'
+    - opened
+    - synchronize
+    - reopened
+    - ready_for_review
   workflow_dispatch: {}
 jobs:
   go-indirect-tracing-workaround:
     strategy:
-      fail-fast: false
       matrix:
         include:
-          - os: ubuntu-latest
-            version: default
+        - os: ubuntu-latest
+          version: stable-v2.14.6
     name: 'Go: workaround for indirect tracing'
     permissions:
       contents: read
-      security-events: read
+      security-events: write
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-      - name: Check out repository
-        uses: actions/checkout@v4
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - name: Install Go
-        uses: actions/setup-go@v5
-        with:
-          go-version: '>=1.21.0'
-          cache: false
-      - uses: ./../action/init
-        with:
-          languages: go
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-      - name: Build code
-        shell: bash
-        run: go build main.go
-      - uses: ./../action/analyze
-      - shell: bash
-        run: |
-          if [[ -z "${CODEQL_ACTION_GO_BINARY}" ]]; then
-            echo "Expected the workaround for indirect tracing of static binaries to trigger, but the" \
-              "CODEQL_ACTION_GO_BINARY environment variable is not set."
-            exit 1
-          fi
-          if [[ ! -f "${CODEQL_ACTION_GO_BINARY}" ]]; then
-            echo "CODEQL_ACTION_GO_BINARY is set, but the corresponding script does not exist."
-            exit 1
-          fi
+    - name: Setup Python on MacOS
+      uses: actions/setup-python@v4
+      if: >-
+        matrix.os == 'macos-latest' && (
+
+        matrix.version == 'stable-20220908' ||
+
+        matrix.version == 'stable-20221211' ||
+
+        matrix.version == 'stable-20230418' ||
+
+        matrix.version == 'stable-v2.13.5' ||
+
+        matrix.version == 'stable-v2.14.6')
+      with:
+        python-version: '3.11'
+    - name: Check out repository
+      uses: actions/checkout@v4
+    - name: Prepare test
+      id: prepare-test
+      uses: ./.github/actions/prepare-test
+      with:
+        version: ${{ matrix.version }}
+        use-all-platform-bundle: 'false'
+    - name: Set environment variable for Swift enablement
+      if: >-
+        runner.os != 'Windows' && (
+            matrix.version == '20220908' ||
+            matrix.version == '20221211'
+        )
+      shell: bash
+      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
+    - uses: actions/setup-go@v4
+      with:
+      # We need a Go version that ships with statically linked binaries on Linux
+        go-version: '>=1.21.0'
+    - uses: ./../action/init
+      with:
+        languages: go
+        tools: ${{ steps.prepare-test.outputs.tools-url }}
+    - name: Build code
+      shell: bash
+      run: go build main.go
+    - uses: ./../action/analyze
+      with:
+        upload-database: false
+    - shell: bash
+      run: |
+        if [[ -z "${CODEQL_ACTION_GO_BINARY}" ]]; then
+          echo "Expected the workaround for indirect tracing of static binaries to trigger, but the" \
+            "CODEQL_ACTION_GO_BINARY environment variable is not set."
+          exit 1
+        fi
+        if [[ ! -f "${CODEQL_ACTION_GO_BINARY}" ]]; then
+          echo "CODEQL_ACTION_GO_BINARY is set, but the corresponding script does not exist."
+          exit 1
+        fi
 
 
-          # Once we start running Bash 4.2 in all environments, we can replace the
-          # `! -z` flag with the more elegant `-v` which confirms that the variable
-          # is actually unset and not potentially set to a blank value.
-          if [[ ! -z "${CODEQL_ACTION_DID_AUTOBUILD_GOLANG}" ]]; then
-            echo "Expected the Go autobuilder not to be run, but the" \
-              "CODEQL_ACTION_DID_AUTOBUILD_GOLANG environment variable was set."
-            exit 1
-          fi
-          cd "$RUNNER_TEMP/codeql_databases"
-          if [[ ! -d go ]]; then
-            echo "Did not find a Go database"
-            exit 1
-          fi
+        # Once we start running Bash 4.2 in all environments, we can replace the
+        # `! -z` flag with the more elegant `-v` which confirms that the variable
+        # is actually unset and not potentially set to a blank value.
+        if [[ ! -z "${CODEQL_ACTION_DID_AUTOBUILD_GOLANG}" ]]; then
+          echo "Expected the Go autobuilder not to be run, but the" \
+            "CODEQL_ACTION_DID_AUTOBUILD_GOLANG environment variable was set."
+          exit 1
+        fi
+        cd "$RUNNER_TEMP/codeql_databases"
+        if [[ ! -d go ]]; then
+          echo "Did not find a Go database"
+          exit 1
+        fi
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__go-tracing-autobuilder.yml

@@ -7,97 +7,118 @@ name: 'PR Check - Go: tracing with autobuilder step'
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
+  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-      - main
-      - releases/v*
+    - main
+    - releases/v*
   pull_request:
     types:
-      - opened
-      - synchronize
-      - reopened
-      - ready_for_review
-  schedule:
-    - cron: '0 5 * * *'
+    - opened
+    - synchronize
+    - reopened
+    - ready_for_review
   workflow_dispatch: {}
 jobs:
   go-tracing-autobuilder:
     strategy:
-      fail-fast: false
       matrix:
         include:
-          - os: ubuntu-latest
-            version: stable-v2.17.6
-          - os: macos-latest
-            version: stable-v2.17.6
-          - os: ubuntu-latest
-            version: stable-v2.18.4
-          - os: macos-latest
-            version: stable-v2.18.4
-          - os: ubuntu-latest
-            version: stable-v2.19.4
-          - os: macos-latest
-            version: stable-v2.19.4
-          - os: ubuntu-latest
-            version: stable-v2.20.7
-          - os: macos-latest
-            version: stable-v2.20.7
-          - os: ubuntu-latest
-            version: stable-v2.21.4
-          - os: macos-latest
-            version: stable-v2.21.4
-          - os: ubuntu-latest
-            version: default
-          - os: macos-latest
-            version: default
-          - os: ubuntu-latest
-            version: linked
-          - os: macos-latest
-            version: linked
-          - os: ubuntu-latest
-            version: nightly-latest
-          - os: macos-latest
-            version: nightly-latest
+        - os: ubuntu-latest
+          version: stable-20220908
+        - os: macos-latest
+          version: stable-20220908
+        - os: ubuntu-latest
+          version: stable-20221211
+        - os: macos-latest
+          version: stable-20221211
+        - os: ubuntu-latest
+          version: stable-20230418
+        - os: macos-latest
+          version: stable-20230418
+        - os: ubuntu-latest
+          version: stable-v2.13.5
+        - os: macos-latest
+          version: stable-v2.13.5
+        - os: ubuntu-latest
+          version: stable-v2.14.6
+        - os: macos-latest
+          version: stable-v2.14.6
+        - os: ubuntu-latest
+          version: default
+        - os: macos-latest
+          version: default
+        - os: ubuntu-latest
+          version: latest
+        - os: macos-latest
+          version: latest
+        - os: ubuntu-latest
+          version: nightly-latest
+        - os: macos-latest
+          version: nightly-latest
     name: 'Go: tracing with autobuilder step'
     permissions:
       contents: read
-      security-events: read
+      security-events: write
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-      - name: Check out repository
-        uses: actions/checkout@v4
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - name: Install Go
-        uses: actions/setup-go@v5
-        with:
-          go-version: '>=1.21.0'
-          cache: false
-      - uses: ./../action/init
-        with:
-          languages: go
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-      - uses: ./../action/autobuild
-      - uses: ./../action/analyze
-      - shell: bash
-        run: |
-          if [[ "${CODEQL_ACTION_DID_AUTOBUILD_GOLANG}" != true ]]; then
-            echo "Expected the Go autobuilder to be run, but the" \
-              "CODEQL_ACTION_DID_AUTOBUILD_GOLANG environment variable was not true."
-            exit 1
-          fi
-          cd "$RUNNER_TEMP/codeql_databases"
-          if [[ ! -d go ]]; then
-            echo "Did not find a Go database"
-            exit 1
-          fi
+    - name: Setup Python on MacOS
+      uses: actions/setup-python@v4
+      if: >-
+        matrix.os == 'macos-latest' && (
+
+        matrix.version == 'stable-20220908' ||
+
+        matrix.version == 'stable-20221211' ||
+
+        matrix.version == 'stable-20230418' ||
+
+        matrix.version == 'stable-v2.13.5' ||
+
+        matrix.version == 'stable-v2.14.6')
+      with:
+        python-version: '3.11'
+    - name: Check out repository
+      uses: actions/checkout@v4
+    - name: Prepare test
+      id: prepare-test
+      uses: ./.github/actions/prepare-test
+      with:
+        version: ${{ matrix.version }}
+        use-all-platform-bundle: 'false'
+    - name: Set environment variable for Swift enablement
+      if: >-
+        runner.os != 'Windows' && (
+            matrix.version == '20220908' ||
+            matrix.version == '20221211'
+        )
+      shell: bash
+      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
+    - uses: actions/setup-go@v4
+      with:
+        go-version: ~1.21.1
+    - uses: ./../action/init
+      with:
+        languages: go
+        tools: ${{ steps.prepare-test.outputs.tools-url }}
+    - uses: ./../action/autobuild
+    - uses: ./../action/analyze
+      with:
+        upload-database: false
+    - shell: bash
+      run: |
+        if [[ "${CODEQL_ACTION_DID_AUTOBUILD_GOLANG}" != true ]]; then
+          echo "Expected the Go autobuilder to be run, but the" \
+            "CODEQL_ACTION_DID_AUTOBUILD_GOLANG environment variable was not true."
+          exit 1
+        fi
+        cd "$RUNNER_TEMP/codeql_databases"
+        if [[ ! -d go ]]; then
+          echo "Did not find a Go database"
+          exit 1
+        fi
     env:
       DOTNET_GENERATE_ASPNET_CERTIFICATE: 'false'
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__go-tracing-custom-build-steps.yml

@@ -7,101 +7,122 @@ name: 'PR Check - Go: tracing with custom build steps'
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
+  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-      - main
-      - releases/v*
+    - main
+    - releases/v*
   pull_request:
     types:
-      - opened
-      - synchronize
-      - reopened
-      - ready_for_review
-  schedule:
-    - cron: '0 5 * * *'
+    - opened
+    - synchronize
+    - reopened
+    - ready_for_review
   workflow_dispatch: {}
 jobs:
   go-tracing-custom-build-steps:
     strategy:
-      fail-fast: false
       matrix:
         include:
-          - os: ubuntu-latest
-            version: stable-v2.17.6
-          - os: macos-latest
-            version: stable-v2.17.6
-          - os: ubuntu-latest
-            version: stable-v2.18.4
-          - os: macos-latest
-            version: stable-v2.18.4
-          - os: ubuntu-latest
-            version: stable-v2.19.4
-          - os: macos-latest
-            version: stable-v2.19.4
-          - os: ubuntu-latest
-            version: stable-v2.20.7
-          - os: macos-latest
-            version: stable-v2.20.7
-          - os: ubuntu-latest
-            version: stable-v2.21.4
-          - os: macos-latest
-            version: stable-v2.21.4
-          - os: ubuntu-latest
-            version: default
-          - os: macos-latest
-            version: default
-          - os: ubuntu-latest
-            version: linked
-          - os: macos-latest
-            version: linked
-          - os: ubuntu-latest
-            version: nightly-latest
-          - os: macos-latest
-            version: nightly-latest
+        - os: ubuntu-latest
+          version: stable-20220908
+        - os: macos-latest
+          version: stable-20220908
+        - os: ubuntu-latest
+          version: stable-20221211
+        - os: macos-latest
+          version: stable-20221211
+        - os: ubuntu-latest
+          version: stable-20230418
+        - os: macos-latest
+          version: stable-20230418
+        - os: ubuntu-latest
+          version: stable-v2.13.5
+        - os: macos-latest
+          version: stable-v2.13.5
+        - os: ubuntu-latest
+          version: stable-v2.14.6
+        - os: macos-latest
+          version: stable-v2.14.6
+        - os: ubuntu-latest
+          version: default
+        - os: macos-latest
+          version: default
+        - os: ubuntu-latest
+          version: latest
+        - os: macos-latest
+          version: latest
+        - os: ubuntu-latest
+          version: nightly-latest
+        - os: macos-latest
+          version: nightly-latest
     name: 'Go: tracing with custom build steps'
     permissions:
       contents: read
-      security-events: read
+      security-events: write
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-      - name: Check out repository
-        uses: actions/checkout@v4
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - name: Install Go
-        uses: actions/setup-go@v5
-        with:
-          go-version: '>=1.21.0'
-          cache: false
-      - uses: ./../action/init
-        with:
-          languages: go
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-      - name: Build code
-        shell: bash
-        run: go build main.go
-      - uses: ./../action/analyze
-      - shell: bash
-        run: |
-          # Once we start running Bash 4.2 in all environments, we can replace the
-          # `! -z` flag with the more elegant `-v` which confirms that the variable
-          # is actually unset and not potentially set to a blank value.
-          if [[ ! -z "${CODEQL_ACTION_DID_AUTOBUILD_GOLANG}" ]]; then
-            echo "Expected the Go autobuilder not to be run, but the" \
-              "CODEQL_ACTION_DID_AUTOBUILD_GOLANG environment variable was set."
-            exit 1
-          fi
-          cd "$RUNNER_TEMP/codeql_databases"
-          if [[ ! -d go ]]; then
-            echo "Did not find a Go database"
-            exit 1
-          fi
+    - name: Setup Python on MacOS
+      uses: actions/setup-python@v4
+      if: >-
+        matrix.os == 'macos-latest' && (
+
+        matrix.version == 'stable-20220908' ||
+
+        matrix.version == 'stable-20221211' ||
+
+        matrix.version == 'stable-20230418' ||
+
+        matrix.version == 'stable-v2.13.5' ||
+
+        matrix.version == 'stable-v2.14.6')
+      with:
+        python-version: '3.11'
+    - name: Check out repository
+      uses: actions/checkout@v4
+    - name: Prepare test
+      id: prepare-test
+      uses: ./.github/actions/prepare-test
+      with:
+        version: ${{ matrix.version }}
+        use-all-platform-bundle: 'false'
+    - name: Set environment variable for Swift enablement
+      if: >-
+        runner.os != 'Windows' && (
+            matrix.version == '20220908' ||
+            matrix.version == '20221211'
+        )
+      shell: bash
+      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
+    - uses: actions/setup-go@v4
+      with:
+        go-version: ~1.21.1
+    - uses: ./../action/init
+      with:
+        languages: go
+        tools: ${{ steps.prepare-test.outputs.tools-url }}
+    - name: Build code
+      shell: bash
+      run: go build main.go
+    - uses: ./../action/analyze
+      with:
+        upload-database: false
+    - shell: bash
+      run: |
+        # Once we start running Bash 4.2 in all environments, we can replace the
+        # `! -z` flag with the more elegant `-v` which confirms that the variable
+        # is actually unset and not potentially set to a blank value.
+        if [[ ! -z "${CODEQL_ACTION_DID_AUTOBUILD_GOLANG}" ]]; then
+          echo "Expected the Go autobuilder not to be run, but the" \
+            "CODEQL_ACTION_DID_AUTOBUILD_GOLANG environment variable was set."
+          exit 1
+        fi
+        cd "$RUNNER_TEMP/codeql_databases"
+        if [[ ! -d go ]]; then
+          echo "Did not find a Go database"
+          exit 1
+        fi
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__go-tracing-legacy-workflow.yml

@@ -7,91 +7,112 @@ name: 'PR Check - Go: tracing with legacy workflow'
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
+  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-      - main
-      - releases/v*
+    - main
+    - releases/v*
   pull_request:
     types:
-      - opened
-      - synchronize
-      - reopened
-      - ready_for_review
-  schedule:
-    - cron: '0 5 * * *'
+    - opened
+    - synchronize
+    - reopened
+    - ready_for_review
   workflow_dispatch: {}
 jobs:
   go-tracing-legacy-workflow:
     strategy:
-      fail-fast: false
       matrix:
         include:
-          - os: ubuntu-latest
-            version: stable-v2.17.6
-          - os: macos-latest
-            version: stable-v2.17.6
-          - os: ubuntu-latest
-            version: stable-v2.18.4
-          - os: macos-latest
-            version: stable-v2.18.4
-          - os: ubuntu-latest
-            version: stable-v2.19.4
-          - os: macos-latest
-            version: stable-v2.19.4
-          - os: ubuntu-latest
-            version: stable-v2.20.7
-          - os: macos-latest
-            version: stable-v2.20.7
-          - os: ubuntu-latest
-            version: stable-v2.21.4
-          - os: macos-latest
-            version: stable-v2.21.4
-          - os: ubuntu-latest
-            version: default
-          - os: macos-latest
-            version: default
-          - os: ubuntu-latest
-            version: linked
-          - os: macos-latest
-            version: linked
-          - os: ubuntu-latest
-            version: nightly-latest
-          - os: macos-latest
-            version: nightly-latest
+        - os: ubuntu-latest
+          version: stable-20220908
+        - os: macos-latest
+          version: stable-20220908
+        - os: ubuntu-latest
+          version: stable-20221211
+        - os: macos-latest
+          version: stable-20221211
+        - os: ubuntu-latest
+          version: stable-20230418
+        - os: macos-latest
+          version: stable-20230418
+        - os: ubuntu-latest
+          version: stable-v2.13.5
+        - os: macos-latest
+          version: stable-v2.13.5
+        - os: ubuntu-latest
+          version: stable-v2.14.6
+        - os: macos-latest
+          version: stable-v2.14.6
+        - os: ubuntu-latest
+          version: default
+        - os: macos-latest
+          version: default
+        - os: ubuntu-latest
+          version: latest
+        - os: macos-latest
+          version: latest
+        - os: ubuntu-latest
+          version: nightly-latest
+        - os: macos-latest
+          version: nightly-latest
     name: 'Go: tracing with legacy workflow'
     permissions:
       contents: read
-      security-events: read
+      security-events: write
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-      - name: Check out repository
-        uses: actions/checkout@v4
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - name: Install Go
-        uses: actions/setup-go@v5
-        with:
-          go-version: '>=1.21.0'
-          cache: false
-      - uses: ./../action/init
-        with:
-          languages: go
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-      - uses: ./../action/analyze
-      - shell: bash
-        run: |
-          cd "$RUNNER_TEMP/codeql_databases"
-          if [[ ! -d go ]]; then
-            echo "Did not find a Go database"
-            exit 1
-          fi
+    - name: Setup Python on MacOS
+      uses: actions/setup-python@v4
+      if: >-
+        matrix.os == 'macos-latest' && (
+
+        matrix.version == 'stable-20220908' ||
+
+        matrix.version == 'stable-20221211' ||
+
+        matrix.version == 'stable-20230418' ||
+
+        matrix.version == 'stable-v2.13.5' ||
+
+        matrix.version == 'stable-v2.14.6')
+      with:
+        python-version: '3.11'
+    - name: Check out repository
+      uses: actions/checkout@v4
+    - name: Prepare test
+      id: prepare-test
+      uses: ./.github/actions/prepare-test
+      with:
+        version: ${{ matrix.version }}
+        use-all-platform-bundle: 'false'
+    - name: Set environment variable for Swift enablement
+      if: >-
+        runner.os != 'Windows' && (
+            matrix.version == '20220908' ||
+            matrix.version == '20221211'
+        )
+      shell: bash
+      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
+    - uses: actions/setup-go@v4
+      with:
+        go-version: ~1.21.1
+    - uses: ./../action/init
+      with:
+        languages: go
+        tools: ${{ steps.prepare-test.outputs.tools-url }}
+    - uses: ./../action/analyze
+      with:
+        upload-database: false
+    - shell: bash
+      run: |
+        cd "$RUNNER_TEMP/codeql_databases"
+        if [[ ! -d go ]]; then
+          echo "Did not find a Go database"
+          exit 1
+        fi
     env:
       DOTNET_GENERATE_ASPNET_CERTIFICATE: 'false'
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__init-with-registries.yml

@@ -7,44 +7,42 @@ name: 'PR Check - Packaging: Download using registries'
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
+  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-      - main
-      - releases/v*
+    - main
+    - releases/v*
   pull_request:
     types:
-      - opened
-      - synchronize
-      - reopened
-      - ready_for_review
-  schedule:
-    - cron: '0 5 * * *'
+    - opened
+    - synchronize
+    - reopened
+    - ready_for_review
   workflow_dispatch: {}
 jobs:
   init-with-registries:
     strategy:
-      fail-fast: false
       matrix:
         include:
-          - os: ubuntu-latest
-            version: default
-          - os: macos-latest
-            version: default
-          - os: windows-latest
-            version: default
-          - os: ubuntu-latest
-            version: linked
-          - os: macos-latest
-            version: linked
-          - os: windows-latest
-            version: linked
-          - os: ubuntu-latest
-            version: nightly-latest
-          - os: macos-latest
-            version: nightly-latest
-          - os: windows-latest
-            version: nightly-latest
+        - os: ubuntu-latest
+          version: default
+        - os: macos-latest
+          version: default
+        - os: windows-latest
+          version: default
+        - os: ubuntu-latest
+          version: latest
+        - os: macos-latest
+          version: latest
+        - os: windows-latest
+          version: latest
+        - os: ubuntu-latest
+          version: nightly-latest
+        - os: macos-latest
+          version: nightly-latest
+        - os: windows-latest
+          version: nightly-latest
     name: 'Packaging: Download using registries'
     permissions:
       contents: read
@@ -53,77 +51,100 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-      - name: Check out repository
-        uses: actions/checkout@v4
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - name: Init with registries
-        uses: ./../action/init
-        with:
-          db-location: ${{ runner.temp }}/customDbLocation
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-          config-file: ./.github/codeql/codeql-config-registries.yml
-          languages: javascript
-          registries: |
-            - url: "https://ghcr.io/v2/"
-              packages: "*/*"
-              token: "${{ secrets.GITHUB_TOKEN }}"
+    - name: Setup Python on MacOS
+      uses: actions/setup-python@v4
+      if: >-
+        matrix.os == 'macos-latest' && (
 
-      - name: Verify packages installed
-        shell: bash
-        run: |
-          PRIVATE_PACK="$HOME/.codeql/packages/codeql-testing/private-pack"
-          CODEQL_PACK1="$HOME/.codeql/packages/codeql-testing/codeql-pack1"
+        matrix.version == 'stable-20220908' ||
 
-          if [[ -d $PRIVATE_PACK ]]
-          then
-              echo "$PRIVATE_PACK was installed."
-          else
-              echo "::error $PRIVATE_PACK pack was not installed."
-              exit 1
-          fi
+        matrix.version == 'stable-20221211' ||
 
-          if [[ -d $CODEQL_PACK1 ]]
-          then
-              echo "$CODEQL_PACK1 was installed."
-          else
-              echo "::error $CODEQL_PACK1 pack was not installed."
-              exit 1
-          fi
+        matrix.version == 'stable-20230418' ||
 
-      - name: Verify qlconfig.yml file was created
-        shell: bash
-        run: |
-          QLCONFIG_PATH=$RUNNER_TEMP/qlconfig.yml
-          echo "Expected qlconfig.yml file to be created at $QLCONFIG_PATH"
-          if [[ -f $QLCONFIG_PATH ]]
-          then
-              echo "qlconfig.yml file was created."
-          else
-              echo "::error qlconfig.yml file was not created."
-              exit 1
-          fi
+        matrix.version == 'stable-v2.13.5' ||
 
-      - name: Verify contents of qlconfig.yml
+        matrix.version == 'stable-v2.14.6')
+      with:
+        python-version: '3.11'
+    - name: Check out repository
+      uses: actions/checkout@v4
+    - name: Prepare test
+      id: prepare-test
+      uses: ./.github/actions/prepare-test
+      with:
+        version: ${{ matrix.version }}
+        use-all-platform-bundle: 'false'
+    - name: Set environment variable for Swift enablement
+      if: >-
+        runner.os != 'Windows' && (
+            matrix.version == '20220908' ||
+            matrix.version == '20221211'
+        )
+      shell: bash
+      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
+    - name: Init with registries
+      uses: ./../action/init
+      with:
+        db-location: ${{ runner.temp }}/customDbLocation
+        tools: ${{ steps.prepare-test.outputs.tools-url }}
+        config-file: ./.github/codeql/codeql-config-registries.yml
+        languages: javascript
+        registries: |
+          - url: "https://ghcr.io/v2/"
+            packages: "*/*"
+            token: "${{ secrets.GITHUB_TOKEN }}"
+
+    - name: Verify packages installed
+      shell: bash
+      run: |
+        PRIVATE_PACK="$HOME/.codeql/packages/codeql-testing/private-pack"
+        CODEQL_PACK1="$HOME/.codeql/packages/codeql-testing/codeql-pack1"
+
+        if [[ -d $PRIVATE_PACK ]]
+        then
+            echo "$PRIVATE_PACK was installed."
+        else
+            echo "::error $PRIVATE_PACK pack was not installed."
+            exit 1
+        fi
+
+        if [[ -d $CODEQL_PACK1 ]]
+        then
+            echo "$CODEQL_PACK1 was installed."
+        else
+            echo "::error $CODEQL_PACK1 pack was not installed."
+            exit 1
+        fi
+
+    - name: Verify qlconfig.yml file was created
+      shell: bash
+      run: |
+        QLCONFIG_PATH=$RUNNER_TEMP/qlconfig.yml
+        echo "Expected qlconfig.yml file to be created at $QLCONFIG_PATH"
+        if [[ -f $QLCONFIG_PATH ]]
+        then
+            echo "qlconfig.yml file was created."
+        else
+            echo "::error qlconfig.yml file was not created."
+            exit 1
+        fi
+
+    - name: Verify contents of qlconfig.yml
     # yq is not available on windows
-        if: runner.os != 'Windows'
-        shell: bash
-        run: |
-          QLCONFIG_PATH=$RUNNER_TEMP/qlconfig.yml
-          cat $QLCONFIG_PATH | yq -e '.registries[] | select(.url == "https://ghcr.io/v2/") | select(.packages == "*/*")'
-          if [[ $? -eq 0 ]]
-          then
-              echo "Registry was added to qlconfig.yml file."
-          else
-              echo "::error Registry was not added to qlconfig.yml file."
-              echo "Contents of qlconfig.yml file:"
-              cat $QLCONFIG_PATH
-              exit 1
-          fi
+      if: runner.os != 'Windows'
+      shell: bash
+      run: |
+        QLCONFIG_PATH=$RUNNER_TEMP/qlconfig.yml
+        cat $QLCONFIG_PATH | yq -e '.registries[] | select(.url == "https://ghcr.io/v2/") | select(.packages == "*/*")'
+        if [[ $? -eq 0 ]]
+        then
+            echo "Registry was added to qlconfig.yml file."
+        else
+            echo "::error Registry was not added to qlconfig.yml file."
+            echo "Contents of qlconfig.yml file:"
+            cat $QLCONFIG_PATH
+            exit 1
+        fi
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__javascript-source-root.yml

@@ -7,68 +7,91 @@ name: PR Check - Custom source root
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
+  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-      - main
-      - releases/v*
+    - main
+    - releases/v*
   pull_request:
     types:
-      - opened
-      - synchronize
-      - reopened
-      - ready_for_review
-  schedule:
-    - cron: '0 5 * * *'
+    - opened
+    - synchronize
+    - reopened
+    - ready_for_review
   workflow_dispatch: {}
 jobs:
   javascript-source-root:
     strategy:
-      fail-fast: false
       matrix:
         include:
-          - os: ubuntu-latest
-            version: linked
-          - os: ubuntu-latest
-            version: default
-          - os: ubuntu-latest
-            version: nightly-latest
+        - os: ubuntu-latest
+          version: latest
+        - os: ubuntu-latest
+          version: default
+        - os: ubuntu-latest
+          version: nightly-latest
     name: Custom source root
     permissions:
       contents: read
-      security-events: read
+      security-events: write
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-      - name: Check out repository
-        uses: actions/checkout@v4
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - name: Move codeql-action
-        shell: bash
-        run: |
-          mkdir ../new-source-root
-          mv * ../new-source-root
-      - uses: ./../action/init
-        with:
-          languages: javascript
-          source-root: ../new-source-root
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-      - uses: ./../action/analyze
-        with:
-          skip-queries: true
-      - name: Assert database exists
-        shell: bash
-        run: |
-          cd "$RUNNER_TEMP/codeql_databases"
-          if [[ ! -d javascript ]]; then
-            echo "Did not find a JavaScript database"
-            exit 1
-          fi
+    - name: Setup Python on MacOS
+      uses: actions/setup-python@v4
+      if: >-
+        matrix.os == 'macos-latest' && (
+
+        matrix.version == 'stable-20220908' ||
+
+        matrix.version == 'stable-20221211' ||
+
+        matrix.version == 'stable-20230418' ||
+
+        matrix.version == 'stable-v2.13.5' ||
+
+        matrix.version == 'stable-v2.14.6')
+      with:
+        python-version: '3.11'
+    - name: Check out repository
+      uses: actions/checkout@v4
+    - name: Prepare test
+      id: prepare-test
+      uses: ./.github/actions/prepare-test
+      with:
+        version: ${{ matrix.version }}
+        use-all-platform-bundle: 'false'
+    - name: Set environment variable for Swift enablement
+      if: >-
+        runner.os != 'Windows' && (
+            matrix.version == '20220908' ||
+            matrix.version == '20221211'
+        )
+      shell: bash
+      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
+    - name: Move codeql-action
+      shell: bash
+      run: |
+        mkdir ../new-source-root
+        mv * ../new-source-root
+    - uses: ./../action/init
+      with:
+        languages: javascript
+        source-root: ../new-source-root
+        tools: ${{ steps.prepare-test.outputs.tools-url }}
+    - uses: ./../action/analyze
+      with:
+        upload-database: false
+        skip-queries: true
+        upload: never
+    - name: Assert database exists
+      shell: bash
+      run: |
+        cd "$RUNNER_TEMP/codeql_databases"
+        if [[ ! -d javascript ]]; then
+          echo "Did not find a JavaScript database"
+          exit 1
+        fi
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__job-run-uuid-sarif.yml

@@ -1,74 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     (cd pr-checks; pip install ruamel.yaml@0.17.31 && python3 sync.py)
-# to regenerate this file.
-
-name: PR Check - Job run UUID added to SARIF
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request:
-    types:
-      - opened
-      - synchronize
-      - reopened
-      - ready_for_review
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch: {}
-jobs:
-  job-run-uuid-sarif:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: ubuntu-latest
-            version: nightly-latest
-    name: Job run UUID added to SARIF
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@v4
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - uses: ./../action/init
-        id: init
-        with:
-          languages: javascript
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-      - uses: ./../action/analyze
-        with:
-          output: ${{ runner.temp }}/results
-      - name: Upload SARIF
-        uses: actions/upload-artifact@v4
-        with:
-          name: ${{ matrix.os }}-${{ matrix.version }}.sarif.json
-          path: ${{ runner.temp }}/results/javascript.sarif
-          retention-days: 7
-      - name: Check results
-        shell: bash
-        run: |
-          cd "$RUNNER_TEMP/results"
-          actual=$(jq -r '.runs[0].properties.jobRunUuid' javascript.sarif)
-          if [[ "$actual" != "$JOB_RUN_UUID" ]]; then
-            echo "Expected SARIF output to contain job run UUID '$JOB_RUN_UUID', but found '$actual'."
-            exit 1
-          else
-            echo "Found job run UUID '$actual'."
-          fi
-    env:
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__language-aliases.yml

@@ -7,58 +7,79 @@ name: PR Check - Language aliases
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
+  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-      - main
-      - releases/v*
+    - main
+    - releases/v*
   pull_request:
     types:
-      - opened
-      - synchronize
-      - reopened
-      - ready_for_review
-  schedule:
-    - cron: '0 5 * * *'
+    - opened
+    - synchronize
+    - reopened
+    - ready_for_review
   workflow_dispatch: {}
 jobs:
   language-aliases:
     strategy:
-      fail-fast: false
       matrix:
         include:
-          - os: ubuntu-latest
-            version: linked
+        - os: ubuntu-latest
+          version: latest
     name: Language aliases
     permissions:
       contents: read
-      security-events: read
+      security-events: write
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-      - name: Check out repository
-        uses: actions/checkout@v4
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - uses: ./../action/init
-        with:
-          languages: C#,java-kotlin,swift,typescript
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
+    - name: Setup Python on MacOS
+      uses: actions/setup-python@v4
+      if: >-
+        matrix.os == 'macos-latest' && (
 
-      - name: Check languages
-        run: |
-          expected_languages="csharp,java,swift,javascript"
-          actual_languages=$(jq -r '.languages | join(",")' "$RUNNER_TEMP"/config)
+        matrix.version == 'stable-20220908' ||
 
-          if [ "$expected_languages" != "$actual_languages" ]; then
-            echo "Resolved languages did not match expected list. " \
-              "Expected languages: $expected_languages. Actual languages: $actual_languages."
-            exit 1
-          fi
+        matrix.version == 'stable-20221211' ||
+
+        matrix.version == 'stable-20230418' ||
+
+        matrix.version == 'stable-v2.13.5' ||
+
+        matrix.version == 'stable-v2.14.6')
+      with:
+        python-version: '3.11'
+    - name: Check out repository
+      uses: actions/checkout@v4
+    - name: Prepare test
+      id: prepare-test
+      uses: ./.github/actions/prepare-test
+      with:
+        version: ${{ matrix.version }}
+        use-all-platform-bundle: 'false'
+    - name: Set environment variable for Swift enablement
+      if: >-
+        runner.os != 'Windows' && (
+            matrix.version == '20220908' ||
+            matrix.version == '20221211'
+        )
+      shell: bash
+      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
+    - uses: ./../action/init
+      with:
+        languages: C#,java-kotlin,swift,typescript
+        tools: ${{ steps.prepare-test.outputs.tools-url }}
+
+    - name: Check languages
+      run: |
+        expected_languages="csharp,java,swift,javascript"
+        actual_languages=$(jq -r '.languages | join(",")' "$RUNNER_TEMP"/config)
+
+        if [ "$expected_languages" != "$actual_languages" ]; then
+          echo "Resolved languages did not match expected list. " \
+            "Expected languages: $expected_languages. Actual languages: $actual_languages."
+          exit 1
+        fi
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__multi-language-autodetect.yml

@@ -7,148 +7,163 @@ name: PR Check - Multi-language repository
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
+  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-      - main
-      - releases/v*
+    - main
+    - releases/v*
   pull_request:
     types:
-      - opened
-      - synchronize
-      - reopened
-      - ready_for_review
-  schedule:
-    - cron: '0 5 * * *'
+    - opened
+    - synchronize
+    - reopened
+    - ready_for_review
   workflow_dispatch: {}
 jobs:
   multi-language-autodetect:
     strategy:
-      fail-fast: false
       matrix:
         include:
-          - os: macos-latest
-            version: stable-v2.17.6
-          - os: ubuntu-latest
-            version: stable-v2.17.6
-          - os: macos-latest
-            version: stable-v2.18.4
-          - os: ubuntu-latest
-            version: stable-v2.18.4
-          - os: macos-latest
-            version: stable-v2.19.4
-          - os: ubuntu-latest
-            version: stable-v2.19.4
-          - os: macos-latest
-            version: stable-v2.20.7
-          - os: ubuntu-latest
-            version: stable-v2.20.7
-          - os: macos-latest
-            version: stable-v2.21.4
-          - os: ubuntu-latest
-            version: stable-v2.21.4
-          - os: macos-latest
-            version: default
-          - os: ubuntu-latest
-            version: default
-          - os: macos-latest
-            version: linked
-          - os: ubuntu-latest
-            version: linked
-          - os: macos-latest
-            version: nightly-latest
-          - os: ubuntu-latest
-            version: nightly-latest
+        - os: ubuntu-latest
+          version: stable-20220908
+        - os: macos-latest
+          version: stable-20220908
+        - os: ubuntu-latest
+          version: stable-20221211
+        - os: macos-latest
+          version: stable-20221211
+        - os: ubuntu-latest
+          version: stable-20230418
+        - os: macos-latest
+          version: stable-20230418
+        - os: ubuntu-latest
+          version: stable-v2.13.5
+        - os: macos-latest
+          version: stable-v2.13.5
+        - os: ubuntu-latest
+          version: stable-v2.14.6
+        - os: macos-latest
+          version: stable-v2.14.6
+        - os: ubuntu-latest
+          version: default
+        - os: macos-latest
+          version: default
+        - os: ubuntu-latest
+          version: latest
+        - os: macos-latest
+          version: latest
+        - os: ubuntu-latest
+          version: nightly-latest
+        - os: macos-latest
+          version: nightly-latest
     name: Multi-language repository
     permissions:
       contents: read
-      security-events: read
+      security-events: write
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-      - name: Check out repository
-        uses: actions/checkout@v4
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - name: Install Go
-        uses: actions/setup-go@v5
-        with:
-          go-version: '>=1.21.0'
-          cache: false
-      - uses: ./../action/init
-        id: init
-        with:
-          db-location: ${{ runner.temp }}/customDbLocation
-          languages: ${{ runner.os == 'Linux' && 'cpp,csharp,go,java,javascript,python,ruby'
-            || '' }}
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
+    - name: Setup Python on MacOS
+      uses: actions/setup-python@v4
+      if: >-
+        matrix.os == 'macos-latest' && (
 
-      - uses: ./../action/.github/actions/setup-swift
-        if: runner.os == 'macOS'
-        with:
-          codeql-path: ${{ steps.init.outputs.codeql-path }}
+        matrix.version == 'stable-20220908' ||
 
-      - name: Build code
-        shell: bash
-        run: ./build.sh
+        matrix.version == 'stable-20221211' ||
 
-      - uses: ./../action/analyze
-        id: analysis
-        with:
-          upload-database: false
+        matrix.version == 'stable-20230418' ||
 
-      - name: Check language autodetect for all languages excluding Swift
-        shell: bash
-        run: |
-          CPP_DB=${{ fromJson(steps.analysis.outputs.db-locations).cpp }}
-          if [[ ! -d $CPP_DB ]] || [[ ! $CPP_DB == ${{ runner.temp }}/customDbLocation/* ]]; then
-            echo "Did not create a database for CPP, or created it in the wrong location."
-            exit 1
-          fi
-          CSHARP_DB=${{ fromJson(steps.analysis.outputs.db-locations).csharp }}
-          if [[ ! -d $CSHARP_DB ]] || [[ ! $CSHARP_DB == ${{ runner.temp }}/customDbLocation/* ]]; then
-            echo "Did not create a database for C Sharp, or created it in the wrong location."
-            exit 1
-          fi
-          GO_DB=${{ fromJson(steps.analysis.outputs.db-locations).go }}
-          if [[ ! -d $GO_DB ]] || [[ ! $GO_DB == ${{ runner.temp }}/customDbLocation/* ]]; then
-            echo "Did not create a database for Go, or created it in the wrong location."
-            exit 1
-          fi
-          JAVA_DB=${{ fromJson(steps.analysis.outputs.db-locations).java }}
-          if [[ ! -d $JAVA_DB ]] || [[ ! $JAVA_DB == ${{ runner.temp }}/customDbLocation/* ]]; then
-            echo "Did not create a database for Java, or created it in the wrong location."
-            exit 1
-          fi
-          JAVASCRIPT_DB=${{ fromJson(steps.analysis.outputs.db-locations).javascript }}
-          if [[ ! -d $JAVASCRIPT_DB ]] || [[ ! $JAVASCRIPT_DB == ${{ runner.temp }}/customDbLocation/* ]]; then
-            echo "Did not create a database for Javascript, or created it in the wrong location."
-            exit 1
-          fi
-          PYTHON_DB=${{ fromJson(steps.analysis.outputs.db-locations).python }}
-          if [[ ! -d $PYTHON_DB ]] || [[ ! $PYTHON_DB == ${{ runner.temp }}/customDbLocation/* ]]; then
-            echo "Did not create a database for Python, or created it in the wrong location."
-            exit 1
-          fi
-          RUBY_DB=${{ fromJson(steps.analysis.outputs.db-locations).ruby }}
-          if [[ ! -d $RUBY_DB ]] || [[ ! $RUBY_DB == ${{ runner.temp }}/customDbLocation/* ]]; then
-            echo "Did not create a database for Ruby, or created it in the wrong location."
-            exit 1
-          fi
+        matrix.version == 'stable-v2.13.5' ||
 
-      - name: Check language autodetect for Swift on macOS
-        if: runner.os == 'macOS'
-        shell: bash
-        run: |
-          SWIFT_DB=${{ fromJson(steps.analysis.outputs.db-locations).swift }}
-          if [[ ! -d $SWIFT_DB ]] || [[ ! $SWIFT_DB == ${{ runner.temp }}/customDbLocation/* ]]; then
-            echo "Did not create a database for Swift, or created it in the wrong location."
-            exit 1
-          fi
+        matrix.version == 'stable-v2.14.6')
+      with:
+        python-version: '3.11'
+    - name: Check out repository
+      uses: actions/checkout@v4
+    - name: Prepare test
+      id: prepare-test
+      uses: ./.github/actions/prepare-test
+      with:
+        version: ${{ matrix.version }}
+        use-all-platform-bundle: 'false'
+    - name: Set environment variable for Swift enablement
+      if: >-
+        runner.os != 'Windows' && (
+            matrix.version == '20220908' ||
+            matrix.version == '20221211'
+        )
+      shell: bash
+      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
+    - uses: ./../action/init
+      id: init
+      with:
+        db-location: ${{ runner.temp }}/customDbLocation
+        tools: ${{ steps.prepare-test.outputs.tools-url }}
+
+    - uses: ./../action/.github/actions/setup-swift
+      with:
+        codeql-path: ${{ steps.init.outputs.codeql-path }}
+
+    - name: Build code
+      shell: bash
+      run: ./build.sh
+
+    - uses: ./../action/analyze
+      id: analysis
+      with:
+        upload-database: false
+
+    - name: Check language autodetect for all languages excluding Swift
+      shell: bash
+      run: |
+        CPP_DB=${{ fromJson(steps.analysis.outputs.db-locations).cpp }}
+        if [[ ! -d $CPP_DB ]] || [[ ! $CPP_DB == ${{ runner.temp }}/customDbLocation/* ]]; then
+          echo "Did not create a database for CPP, or created it in the wrong location."
+          exit 1
+        fi
+        CSHARP_DB=${{ fromJson(steps.analysis.outputs.db-locations).csharp }}
+        if [[ ! -d $CSHARP_DB ]] || [[ ! $CSHARP_DB == ${{ runner.temp }}/customDbLocation/* ]]; then
+          echo "Did not create a database for C Sharp, or created it in the wrong location."
+          exit 1
+        fi
+        GO_DB=${{ fromJson(steps.analysis.outputs.db-locations).go }}
+        if [[ ! -d $GO_DB ]] || [[ ! $GO_DB == ${{ runner.temp }}/customDbLocation/* ]]; then
+          echo "Did not create a database for Go, or created it in the wrong location."
+          exit 1
+        fi
+        JAVA_DB=${{ fromJson(steps.analysis.outputs.db-locations).java }}
+        if [[ ! -d $JAVA_DB ]] || [[ ! $JAVA_DB == ${{ runner.temp }}/customDbLocation/* ]]; then
+          echo "Did not create a database for Java, or created it in the wrong location."
+          exit 1
+        fi
+        JAVASCRIPT_DB=${{ fromJson(steps.analysis.outputs.db-locations).javascript }}
+        if [[ ! -d $JAVASCRIPT_DB ]] || [[ ! $JAVASCRIPT_DB == ${{ runner.temp }}/customDbLocation/* ]]; then
+          echo "Did not create a database for Javascript, or created it in the wrong location."
+          exit 1
+        fi
+        PYTHON_DB=${{ fromJson(steps.analysis.outputs.db-locations).python }}
+        if [[ ! -d $PYTHON_DB ]] || [[ ! $PYTHON_DB == ${{ runner.temp }}/customDbLocation/* ]]; then
+          echo "Did not create a database for Python, or created it in the wrong location."
+          exit 1
+        fi
+        RUBY_DB=${{ fromJson(steps.analysis.outputs.db-locations).ruby }}
+        if [[ ! -d $RUBY_DB ]] || [[ ! $RUBY_DB == ${{ runner.temp }}/customDbLocation/* ]]; then
+          echo "Did not create a database for Ruby, or created it in the wrong location."
+          exit 1
+        fi
+
+    - name: Check language autodetect for Swift
+      if: >-
+        env.CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT == 'true' || 
+            (runner.os != 'Windows' && matrix.version == 'nightly-latest')
+      shell: bash
+      run: |
+        SWIFT_DB=${{ fromJson(steps.analysis.outputs.db-locations).swift }}
+        if [[ ! -d $SWIFT_DB ]] || [[ ! $SWIFT_DB == ${{ runner.temp }}/customDbLocation/* ]]; then
+          echo "Did not create a database for Swift, or created it in the wrong location."
+          exit 1
+        fi
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__packaging-codescanning-config-inputs-js.yml

@@ -7,100 +7,118 @@ name: 'PR Check - Packaging: Config and input passed to the CLI'
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
+  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-      - main
-      - releases/v*
+    - main
+    - releases/v*
   pull_request:
     types:
-      - opened
-      - synchronize
-      - reopened
-      - ready_for_review
-  schedule:
-    - cron: '0 5 * * *'
+    - opened
+    - synchronize
+    - reopened
+    - ready_for_review
   workflow_dispatch: {}
 jobs:
   packaging-codescanning-config-inputs-js:
     strategy:
-      fail-fast: false
       matrix:
         include:
-          - os: ubuntu-latest
-            version: linked
-          - os: macos-latest
-            version: linked
-          - os: windows-latest
-            version: linked
-          - os: ubuntu-latest
-            version: default
-          - os: macos-latest
-            version: default
-          - os: windows-latest
-            version: default
-          - os: ubuntu-latest
-            version: nightly-latest
-          - os: macos-latest
-            version: nightly-latest
-          - os: windows-latest
-            version: nightly-latest
+        - os: ubuntu-latest
+          version: latest
+        - os: macos-latest
+          version: latest
+        - os: windows-latest
+          version: latest
+        - os: ubuntu-latest
+          version: default
+        - os: macos-latest
+          version: default
+        - os: windows-latest
+          version: default
+        - os: ubuntu-latest
+          version: nightly-latest
+        - os: macos-latest
+          version: nightly-latest
+        - os: windows-latest
+          version: nightly-latest
     name: 'Packaging: Config and input passed to the CLI'
     permissions:
       contents: read
-      security-events: read
+      security-events: write
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-      - name: Check out repository
-        uses: actions/checkout@v4
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - name: Install Go
-        uses: actions/setup-go@v5
-        with:
-          go-version: '>=1.21.0'
-          cache: false
-      - uses: ./../action/init
-        with:
-          config-file: .github/codeql/codeql-config-packaging3.yml
-          packs: +codeql-testing/codeql-pack1@1.0.0
-          languages: javascript
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-      - name: Build code
-        shell: bash
-        run: ./build.sh
-      - uses: ./../action/analyze
-        with:
-          output: ${{ runner.temp }}/results
-          upload-database: false
+    - name: Setup Python on MacOS
+      uses: actions/setup-python@v4
+      if: >-
+        matrix.os == 'macos-latest' && (
 
-      - name: Check results
-        uses: ./../action/.github/actions/check-sarif
-        with:
-          sarif-file: ${{ runner.temp }}/results/javascript.sarif
-          queries-run:
-            javascript/example/empty-or-one-block,javascript/example/empty-or-one-block,javascript/example/other-query-block,javascript/example/two-block
-          queries-not-run: foo,bar
+        matrix.version == 'stable-20220908' ||
 
-      - name: Assert Results
-        shell: bash
-        run: |
-          cd "$RUNNER_TEMP/results"
-          # We should have 4 hits from these rules
-          EXPECTED_RULES="javascript/example/empty-or-one-block javascript/example/empty-or-one-block javascript/example/other-query-block javascript/example/two-block"
+        matrix.version == 'stable-20221211' ||
 
-          # use tr to replace newlines with spaces and xargs to trim leading and trailing whitespace
-          RULES="$(cat javascript.sarif | jq -r '.runs[0].results[].ruleId' | sort | tr "\n\r" " " | xargs)"
-          echo "Found matching rules '$RULES'"
-          if [ "$RULES" != "$EXPECTED_RULES" ]; then
-            echo "Did not match expected rules '$EXPECTED_RULES'."
-            exit 1
-          fi
+        matrix.version == 'stable-20230418' ||
+
+        matrix.version == 'stable-v2.13.5' ||
+
+        matrix.version == 'stable-v2.14.6')
+      with:
+        python-version: '3.11'
+    - name: Check out repository
+      uses: actions/checkout@v4
+    - name: Prepare test
+      id: prepare-test
+      uses: ./.github/actions/prepare-test
+      with:
+        version: ${{ matrix.version }}
+        use-all-platform-bundle: 'false'
+    - name: Set environment variable for Swift enablement
+      if: >-
+        runner.os != 'Windows' && (
+            matrix.version == '20220908' ||
+            matrix.version == '20221211'
+        )
+      shell: bash
+      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
+    - uses: ./../action/init
+      with:
+        config-file: .github/codeql/codeql-config-packaging3.yml
+        packs: +codeql-testing/codeql-pack1@1.0.0
+        languages: javascript
+        tools: ${{ steps.prepare-test.outputs.tools-url }}
+    - name: Build code
+      shell: bash
+      run: ./build.sh
+    - uses: ./../action/analyze
+      with:
+        output: ${{ runner.temp }}/results
+        upload-database: false
+
+    - name: Check results
+      uses: ./../action/.github/actions/check-sarif
+      with:
+        sarif-file: ${{ runner.temp }}/results/javascript.sarif
+        queries-run: 
+          javascript/example/empty-or-one-block,javascript/example/empty-or-one-block,javascript/example/other-query-block,javascript/example/two-block
+        queries-not-run: foo,bar
+
+    - name: Assert Results
+      shell: bash
+      run: |
+        cd "$RUNNER_TEMP/results"
+        # We should have 4 hits from these rules
+        EXPECTED_RULES="javascript/example/empty-or-one-block javascript/example/empty-or-one-block javascript/example/other-query-block javascript/example/two-block"
+
+        # use tr to replace newlines with spaces and xargs to trim leading and trailing whitespace
+        RULES="$(cat javascript.sarif | jq -r '.runs[0].results[].ruleId' | sort | tr "\n\r" " " | xargs)"
+        echo "Found matching rules '$RULES'"
+        if [ "$RULES" != "$EXPECTED_RULES" ]; then
+          echo "Did not match expected rules '$EXPECTED_RULES'."
+          exit 1
+        fi
     env:
+      CODEQL_PASS_CONFIG_TO_CLI: true
+
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__packaging-config-inputs-js.yml

@@ -7,100 +7,116 @@ name: 'PR Check - Packaging: Config and input'
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
+  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-      - main
-      - releases/v*
+    - main
+    - releases/v*
   pull_request:
     types:
-      - opened
-      - synchronize
-      - reopened
-      - ready_for_review
-  schedule:
-    - cron: '0 5 * * *'
+    - opened
+    - synchronize
+    - reopened
+    - ready_for_review
   workflow_dispatch: {}
 jobs:
   packaging-config-inputs-js:
     strategy:
-      fail-fast: false
       matrix:
         include:
-          - os: ubuntu-latest
-            version: linked
-          - os: macos-latest
-            version: linked
-          - os: windows-latest
-            version: linked
-          - os: ubuntu-latest
-            version: default
-          - os: macos-latest
-            version: default
-          - os: windows-latest
-            version: default
-          - os: ubuntu-latest
-            version: nightly-latest
-          - os: macos-latest
-            version: nightly-latest
-          - os: windows-latest
-            version: nightly-latest
+        - os: ubuntu-latest
+          version: latest
+        - os: macos-latest
+          version: latest
+        - os: windows-latest
+          version: latest
+        - os: ubuntu-latest
+          version: default
+        - os: macos-latest
+          version: default
+        - os: windows-latest
+          version: default
+        - os: ubuntu-latest
+          version: nightly-latest
+        - os: macos-latest
+          version: nightly-latest
+        - os: windows-latest
+          version: nightly-latest
     name: 'Packaging: Config and input'
     permissions:
       contents: read
-      security-events: read
+      security-events: write
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-      - name: Check out repository
-        uses: actions/checkout@v4
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - name: Install Go
-        uses: actions/setup-go@v5
-        with:
-          go-version: '>=1.21.0'
-          cache: false
-      - uses: ./../action/init
-        with:
-          config-file: .github/codeql/codeql-config-packaging3.yml
-          packs: +codeql-testing/codeql-pack1@1.0.0
-          languages: javascript
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-      - name: Build code
-        shell: bash
-        run: ./build.sh
-      - uses: ./../action/analyze
-        with:
-          output: ${{ runner.temp }}/results
-          upload-database: false
+    - name: Setup Python on MacOS
+      uses: actions/setup-python@v4
+      if: >-
+        matrix.os == 'macos-latest' && (
 
-      - name: Check results
-        uses: ./../action/.github/actions/check-sarif
-        with:
-          sarif-file: ${{ runner.temp }}/results/javascript.sarif
-          queries-run:
-            javascript/example/empty-or-one-block,javascript/example/empty-or-one-block,javascript/example/other-query-block,javascript/example/two-block
-          queries-not-run: foo,bar
+        matrix.version == 'stable-20220908' ||
 
-      - name: Assert Results
-        shell: bash
-        run: |
-          cd "$RUNNER_TEMP/results"
-          # We should have 4 hits from these rules
-          EXPECTED_RULES="javascript/example/empty-or-one-block javascript/example/empty-or-one-block javascript/example/other-query-block javascript/example/two-block"
+        matrix.version == 'stable-20221211' ||
 
-          # use tr to replace newlines with spaces and xargs to trim leading and trailing whitespace
-          RULES="$(cat javascript.sarif | jq -r '.runs[0].results[].ruleId' | sort | tr "\n\r" " " | xargs)"
-          echo "Found matching rules '$RULES'"
-          if [ "$RULES" != "$EXPECTED_RULES" ]; then
-            echo "Did not match expected rules '$EXPECTED_RULES'."
-            exit 1
-          fi
+        matrix.version == 'stable-20230418' ||
+
+        matrix.version == 'stable-v2.13.5' ||
+
+        matrix.version == 'stable-v2.14.6')
+      with:
+        python-version: '3.11'
+    - name: Check out repository
+      uses: actions/checkout@v4
+    - name: Prepare test
+      id: prepare-test
+      uses: ./.github/actions/prepare-test
+      with:
+        version: ${{ matrix.version }}
+        use-all-platform-bundle: 'false'
+    - name: Set environment variable for Swift enablement
+      if: >-
+        runner.os != 'Windows' && (
+            matrix.version == '20220908' ||
+            matrix.version == '20221211'
+        )
+      shell: bash
+      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
+    - uses: ./../action/init
+      with:
+        config-file: .github/codeql/codeql-config-packaging3.yml
+        packs: +codeql-testing/codeql-pack1@1.0.0
+        languages: javascript
+        tools: ${{ steps.prepare-test.outputs.tools-url }}
+    - name: Build code
+      shell: bash
+      run: ./build.sh
+    - uses: ./../action/analyze
+      with:
+        output: ${{ runner.temp }}/results
+        upload-database: false
+
+    - name: Check results
+      uses: ./../action/.github/actions/check-sarif
+      with:
+        sarif-file: ${{ runner.temp }}/results/javascript.sarif
+        queries-run: 
+          javascript/example/empty-or-one-block,javascript/example/empty-or-one-block,javascript/example/other-query-block,javascript/example/two-block
+        queries-not-run: foo,bar
+
+    - name: Assert Results
+      shell: bash
+      run: |
+        cd "$RUNNER_TEMP/results"
+        # We should have 4 hits from these rules
+        EXPECTED_RULES="javascript/example/empty-or-one-block javascript/example/empty-or-one-block javascript/example/other-query-block javascript/example/two-block"
+
+        # use tr to replace newlines with spaces and xargs to trim leading and trailing whitespace
+        RULES="$(cat javascript.sarif | jq -r '.runs[0].results[].ruleId' | sort | tr "\n\r" " " | xargs)"
+        echo "Found matching rules '$RULES'"
+        if [ "$RULES" != "$EXPECTED_RULES" ]; then
+          echo "Did not match expected rules '$EXPECTED_RULES'."
+          exit 1
+        fi
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__packaging-config-js.yml

@@ -7,99 +7,115 @@ name: 'PR Check - Packaging: Config file'
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
+  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-      - main
-      - releases/v*
+    - main
+    - releases/v*
   pull_request:
     types:
-      - opened
-      - synchronize
-      - reopened
-      - ready_for_review
-  schedule:
-    - cron: '0 5 * * *'
+    - opened
+    - synchronize
+    - reopened
+    - ready_for_review
   workflow_dispatch: {}
 jobs:
   packaging-config-js:
     strategy:
-      fail-fast: false
       matrix:
         include:
-          - os: ubuntu-latest
-            version: linked
-          - os: macos-latest
-            version: linked
-          - os: windows-latest
-            version: linked
-          - os: ubuntu-latest
-            version: default
-          - os: macos-latest
-            version: default
-          - os: windows-latest
-            version: default
-          - os: ubuntu-latest
-            version: nightly-latest
-          - os: macos-latest
-            version: nightly-latest
-          - os: windows-latest
-            version: nightly-latest
+        - os: ubuntu-latest
+          version: latest
+        - os: macos-latest
+          version: latest
+        - os: windows-latest
+          version: latest
+        - os: ubuntu-latest
+          version: default
+        - os: macos-latest
+          version: default
+        - os: windows-latest
+          version: default
+        - os: ubuntu-latest
+          version: nightly-latest
+        - os: macos-latest
+          version: nightly-latest
+        - os: windows-latest
+          version: nightly-latest
     name: 'Packaging: Config file'
     permissions:
       contents: read
-      security-events: read
+      security-events: write
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-      - name: Check out repository
-        uses: actions/checkout@v4
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - name: Install Go
-        uses: actions/setup-go@v5
-        with:
-          go-version: '>=1.21.0'
-          cache: false
-      - uses: ./../action/init
-        with:
-          config-file: .github/codeql/codeql-config-packaging.yml
-          languages: javascript
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-      - name: Build code
-        shell: bash
-        run: ./build.sh
-      - uses: ./../action/analyze
-        with:
-          output: ${{ runner.temp }}/results
-          upload-database: false
+    - name: Setup Python on MacOS
+      uses: actions/setup-python@v4
+      if: >-
+        matrix.os == 'macos-latest' && (
 
-      - name: Check results
-        uses: ./../action/.github/actions/check-sarif
-        with:
-          sarif-file: ${{ runner.temp }}/results/javascript.sarif
-          queries-run:
-            javascript/example/empty-or-one-block,javascript/example/empty-or-one-block,javascript/example/other-query-block,javascript/example/two-block
-          queries-not-run: foo,bar
+        matrix.version == 'stable-20220908' ||
 
-      - name: Assert Results
-        shell: bash
-        run: |
-          cd "$RUNNER_TEMP/results"
-          # We should have 4 hits from these rules
-          EXPECTED_RULES="javascript/example/empty-or-one-block javascript/example/empty-or-one-block javascript/example/other-query-block javascript/example/two-block"
+        matrix.version == 'stable-20221211' ||
 
-          # use tr to replace newlines with spaces and xargs to trim leading and trailing whitespace
-          RULES="$(cat javascript.sarif | jq -r '.runs[0].results[].ruleId' | sort | tr "\n\r" " " | xargs)"
-          echo "Found matching rules '$RULES'"
-          if [ "$RULES" != "$EXPECTED_RULES" ]; then
-            echo "Did not match expected rules '$EXPECTED_RULES'."
-            exit 1
-          fi
+        matrix.version == 'stable-20230418' ||
+
+        matrix.version == 'stable-v2.13.5' ||
+
+        matrix.version == 'stable-v2.14.6')
+      with:
+        python-version: '3.11'
+    - name: Check out repository
+      uses: actions/checkout@v4
+    - name: Prepare test
+      id: prepare-test
+      uses: ./.github/actions/prepare-test
+      with:
+        version: ${{ matrix.version }}
+        use-all-platform-bundle: 'false'
+    - name: Set environment variable for Swift enablement
+      if: >-
+        runner.os != 'Windows' && (
+            matrix.version == '20220908' ||
+            matrix.version == '20221211'
+        )
+      shell: bash
+      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
+    - uses: ./../action/init
+      with:
+        config-file: .github/codeql/codeql-config-packaging.yml
+        languages: javascript
+        tools: ${{ steps.prepare-test.outputs.tools-url }}
+    - name: Build code
+      shell: bash
+      run: ./build.sh
+    - uses: ./../action/analyze
+      with:
+        output: ${{ runner.temp }}/results
+        upload-database: false
+
+    - name: Check results
+      uses: ./../action/.github/actions/check-sarif
+      with:
+        sarif-file: ${{ runner.temp }}/results/javascript.sarif
+        queries-run: 
+          javascript/example/empty-or-one-block,javascript/example/empty-or-one-block,javascript/example/other-query-block,javascript/example/two-block
+        queries-not-run: foo,bar
+
+    - name: Assert Results
+      shell: bash
+      run: |
+        cd "$RUNNER_TEMP/results"
+        # We should have 4 hits from these rules
+        EXPECTED_RULES="javascript/example/empty-or-one-block javascript/example/empty-or-one-block javascript/example/other-query-block javascript/example/two-block"
+
+        # use tr to replace newlines with spaces and xargs to trim leading and trailing whitespace
+        RULES="$(cat javascript.sarif | jq -r '.runs[0].results[].ruleId' | sort | tr "\n\r" " " | xargs)"
+        echo "Found matching rules '$RULES'"
+        if [ "$RULES" != "$EXPECTED_RULES" ]; then
+          echo "Did not match expected rules '$EXPECTED_RULES'."
+          exit 1
+        fi
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__packaging-inputs-js.yml

@@ -7,99 +7,115 @@ name: 'PR Check - Packaging: Action input'
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
+  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-      - main
-      - releases/v*
+    - main
+    - releases/v*
   pull_request:
     types:
-      - opened
-      - synchronize
-      - reopened
-      - ready_for_review
-  schedule:
-    - cron: '0 5 * * *'
+    - opened
+    - synchronize
+    - reopened
+    - ready_for_review
   workflow_dispatch: {}
 jobs:
   packaging-inputs-js:
     strategy:
-      fail-fast: false
       matrix:
         include:
-          - os: ubuntu-latest
-            version: linked
-          - os: macos-latest
-            version: linked
-          - os: windows-latest
-            version: linked
-          - os: ubuntu-latest
-            version: default
-          - os: macos-latest
-            version: default
-          - os: windows-latest
-            version: default
-          - os: ubuntu-latest
-            version: nightly-latest
-          - os: macos-latest
-            version: nightly-latest
-          - os: windows-latest
-            version: nightly-latest
+        - os: ubuntu-latest
+          version: latest
+        - os: macos-latest
+          version: latest
+        - os: windows-latest
+          version: latest
+        - os: ubuntu-latest
+          version: default
+        - os: macos-latest
+          version: default
+        - os: windows-latest
+          version: default
+        - os: ubuntu-latest
+          version: nightly-latest
+        - os: macos-latest
+          version: nightly-latest
+        - os: windows-latest
+          version: nightly-latest
     name: 'Packaging: Action input'
     permissions:
       contents: read
-      security-events: read
+      security-events: write
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-      - name: Check out repository
-        uses: actions/checkout@v4
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - name: Install Go
-        uses: actions/setup-go@v5
-        with:
-          go-version: '>=1.21.0'
-          cache: false
-      - uses: ./../action/init
-        with:
-          config-file: .github/codeql/codeql-config-packaging2.yml
-          languages: javascript
-          packs: codeql-testing/codeql-pack1@1.0.0, codeql-testing/codeql-pack2, codeql-testing/codeql-pack3:other-query.ql
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-      - name: Build code
-        shell: bash
-        run: ./build.sh
-      - uses: ./../action/analyze
-        with:
-          output: ${{ runner.temp }}/results
+    - name: Setup Python on MacOS
+      uses: actions/setup-python@v4
+      if: >-
+        matrix.os == 'macos-latest' && (
 
-      - name: Check results
-        uses: ./../action/.github/actions/check-sarif
-        with:
-          sarif-file: ${{ runner.temp }}/results/javascript.sarif
-          queries-run:
-            javascript/example/empty-or-one-block,javascript/example/empty-or-one-block,javascript/example/other-query-block,javascript/example/two-block
-          queries-not-run: foo,bar
+        matrix.version == 'stable-20220908' ||
 
-      - name: Assert Results
-        shell: bash
-        run: |
-          cd "$RUNNER_TEMP/results"
-          # We should have 4 hits from these rules
-          EXPECTED_RULES="javascript/example/empty-or-one-block javascript/example/empty-or-one-block javascript/example/other-query-block javascript/example/two-block"
+        matrix.version == 'stable-20221211' ||
 
-          # use tr to replace newlines with spaces and xargs to trim leading and trailing whitespace
-          RULES="$(cat javascript.sarif | jq -r '.runs[0].results[].ruleId' | sort | tr "\n\r" " " | xargs)"
-          echo "Found matching rules '$RULES'"
-          if [ "$RULES" != "$EXPECTED_RULES" ]; then
-            echo "Did not match expected rules '$EXPECTED_RULES'."
-            exit 1
-          fi
+        matrix.version == 'stable-20230418' ||
+
+        matrix.version == 'stable-v2.13.5' ||
+
+        matrix.version == 'stable-v2.14.6')
+      with:
+        python-version: '3.11'
+    - name: Check out repository
+      uses: actions/checkout@v4
+    - name: Prepare test
+      id: prepare-test
+      uses: ./.github/actions/prepare-test
+      with:
+        version: ${{ matrix.version }}
+        use-all-platform-bundle: 'false'
+    - name: Set environment variable for Swift enablement
+      if: >-
+        runner.os != 'Windows' && (
+            matrix.version == '20220908' ||
+            matrix.version == '20221211'
+        )
+      shell: bash
+      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
+    - uses: ./../action/init
+      with:
+        config-file: .github/codeql/codeql-config-packaging2.yml
+        languages: javascript
+        packs: codeql-testing/codeql-pack1@1.0.0, codeql-testing/codeql-pack2, codeql-testing/codeql-pack3:other-query.ql
+        tools: ${{ steps.prepare-test.outputs.tools-url }}
+    - name: Build code
+      shell: bash
+      run: ./build.sh
+    - uses: ./../action/analyze
+      with:
+        output: ${{ runner.temp }}/results
+
+    - name: Check results
+      uses: ./../action/.github/actions/check-sarif
+      with:
+        sarif-file: ${{ runner.temp }}/results/javascript.sarif
+        queries-run: 
+          javascript/example/empty-or-one-block,javascript/example/empty-or-one-block,javascript/example/other-query-block,javascript/example/two-block
+        queries-not-run: foo,bar
+
+    - name: Assert Results
+      shell: bash
+      run: |
+        cd "$RUNNER_TEMP/results"
+        # We should have 4 hits from these rules
+        EXPECTED_RULES="javascript/example/empty-or-one-block javascript/example/empty-or-one-block javascript/example/other-query-block javascript/example/two-block"
+
+        # use tr to replace newlines with spaces and xargs to trim leading and trailing whitespace
+        RULES="$(cat javascript.sarif | jq -r '.runs[0].results[].ruleId' | sort | tr "\n\r" " " | xargs)"
+        echo "Found matching rules '$RULES'"
+        if [ "$RULES" != "$EXPECTED_RULES" ]; then
+          echo "Did not match expected rules '$EXPECTED_RULES'."
+          exit 1
+        fi
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__quality-queries.yml

@@ -1,117 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     (cd pr-checks; pip install ruamel.yaml@0.17.31 && python3 sync.py)
-# to regenerate this file.
-
-name: PR Check - Quality queries input
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request:
-    types:
-      - opened
-      - synchronize
-      - reopened
-      - ready_for_review
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch: {}
-jobs:
-  quality-queries:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: ubuntu-latest
-            version: linked
-          - os: macos-latest
-            version: linked
-          - os: windows-latest
-            version: linked
-          - os: ubuntu-latest
-            version: nightly-latest
-          - os: macos-latest
-            version: nightly-latest
-          - os: windows-latest
-            version: nightly-latest
-    name: Quality queries input
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@v4
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - uses: ./../action/init
-        with:
-          languages: javascript
-          quality-queries: code-quality
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-      - uses: ./../action/analyze
-        with:
-          output: ${{ runner.temp }}/results
-          upload-database: false
-      - name: Upload security SARIF
-        uses: actions/upload-artifact@v4
-        with:
-          name: quality-queries-${{ matrix.os }}-${{ matrix.version }}.sarif.json
-          path: ${{ runner.temp }}/results/javascript.sarif
-          retention-days: 7
-      - name: Upload quality SARIF
-        uses: actions/upload-artifact@v4
-        with:
-          name: quality-queries-${{ matrix.os }}-${{ matrix.version }}.quality.sarif.json
-          path: ${{ runner.temp }}/results/javascript.quality.sarif
-          retention-days: 7
-      - name: Check quality query does not appear in security SARIF
-        uses: actions/github-script@v7
-        env:
-          SARIF_PATH: ${{ runner.temp }}/results/javascript.sarif
-          EXPECT_PRESENT: 'false'
-        with:
-          script: ${{ env.CHECK_SCRIPT }}
-      - name: Check quality query appears in quality SARIF
-        uses: actions/github-script@v7
-        env:
-          SARIF_PATH: ${{ runner.temp }}/results/javascript.quality.sarif
-          EXPECT_PRESENT: 'true'
-        with:
-          script: ${{ env.CHECK_SCRIPT }}
-    env:
-      CHECK_SCRIPT: |
-        const fs = require('fs');
-
-        const sarif = JSON.parse(fs.readFileSync(process.env['SARIF_PATH'], 'utf8'));
-        const expectPresent = JSON.parse(process.env['EXPECT_PRESENT']);
-        const run = sarif.runs[0];
-        const extensions = run.tool.extensions;
-
-        if (extensions === undefined) {
-          core.setFailed('`extensions` property not found in the SARIF run property bag.');
-        }
-
-        // ID of a query we want to check the presence for
-        const targetId = 'js/regex/always-matches';
-        const found = extensions.find(extension => extension.rules && extension.rules.find(rule => rule.id === targetId));
-
-        if (found && expectPresent) {
-          console.log(`Found rule with id '${targetId}'.`);
-        } else if (!found && !expectPresent) {
-          console.log(`Rule with id '${targetId}' was not found.`);
-        } else {
-          core.setFailed(`${ found ? "Found" : "Didn't find" } rule ${targetId}`);
-        }
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__remote-config.yml

@@ -7,60 +7,120 @@ name: PR Check - Remote config file
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
+  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-      - main
-      - releases/v*
+    - main
+    - releases/v*
   pull_request:
     types:
-      - opened
-      - synchronize
-      - reopened
-      - ready_for_review
-  schedule:
-    - cron: '0 5 * * *'
+    - opened
+    - synchronize
+    - reopened
+    - ready_for_review
   workflow_dispatch: {}
 jobs:
   remote-config:
     strategy:
-      fail-fast: false
       matrix:
         include:
-          - os: ubuntu-latest
-            version: linked
-          - os: ubuntu-latest
-            version: nightly-latest
+        - os: ubuntu-latest
+          version: stable-20220908
+        - os: macos-latest
+          version: stable-20220908
+        - os: windows-latest
+          version: stable-20220908
+        - os: ubuntu-latest
+          version: stable-20221211
+        - os: macos-latest
+          version: stable-20221211
+        - os: windows-latest
+          version: stable-20221211
+        - os: ubuntu-latest
+          version: stable-20230418
+        - os: macos-latest
+          version: stable-20230418
+        - os: windows-latest
+          version: stable-20230418
+        - os: ubuntu-latest
+          version: stable-v2.13.5
+        - os: macos-latest
+          version: stable-v2.13.5
+        - os: windows-latest
+          version: stable-v2.13.5
+        - os: ubuntu-latest
+          version: stable-v2.14.6
+        - os: macos-latest
+          version: stable-v2.14.6
+        - os: windows-latest
+          version: stable-v2.14.6
+        - os: ubuntu-latest
+          version: default
+        - os: macos-latest
+          version: default
+        - os: windows-latest
+          version: default
+        - os: ubuntu-latest
+          version: latest
+        - os: macos-latest
+          version: latest
+        - os: windows-latest
+          version: latest
+        - os: ubuntu-latest
+          version: nightly-latest
+        - os: macos-latest
+          version: nightly-latest
+        - os: windows-latest
+          version: nightly-latest
     name: Remote config file
     permissions:
       contents: read
-      security-events: read
+      security-events: write
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-      - name: Check out repository
-        uses: actions/checkout@v4
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - name: Install Go
-        uses: actions/setup-go@v5
-        with:
-          go-version: '>=1.21.0'
-          cache: false
-      - uses: ./../action/init
-        with:
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-          languages: cpp,csharp,java,javascript,python
-          config-file: ${{ github.repository }}/tests/multi-language-repo/.github/codeql/custom-queries.yml@${{
-            github.sha }}
-      - name: Build code
-        shell: bash
-        run: ./build.sh
-      - uses: ./../action/analyze
+    - name: Setup Python on MacOS
+      uses: actions/setup-python@v4
+      if: >-
+        matrix.os == 'macos-latest' && (
+
+        matrix.version == 'stable-20220908' ||
+
+        matrix.version == 'stable-20221211' ||
+
+        matrix.version == 'stable-20230418' ||
+
+        matrix.version == 'stable-v2.13.5' ||
+
+        matrix.version == 'stable-v2.14.6')
+      with:
+        python-version: '3.11'
+    - name: Check out repository
+      uses: actions/checkout@v4
+    - name: Prepare test
+      id: prepare-test
+      uses: ./.github/actions/prepare-test
+      with:
+        version: ${{ matrix.version }}
+        use-all-platform-bundle: 'false'
+    - name: Set environment variable for Swift enablement
+      if: >-
+        runner.os != 'Windows' && (
+            matrix.version == '20220908' ||
+            matrix.version == '20221211'
+        )
+      shell: bash
+      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
+    - uses: ./../action/init
+      with:
+        tools: ${{ steps.prepare-test.outputs.tools-url }}
+        languages: cpp,csharp,java,javascript,python
+        config-file: ${{ github.repository }}/tests/multi-language-repo/.github/codeql/custom-queries.yml@${{
+          github.sha }}
+    - name: Build code
+      shell: bash
+      run: ./build.sh
+    - uses: ./../action/analyze
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__resolve-environment-action.yml

@@ -7,84 +7,113 @@ name: PR Check - Resolve environment
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
+  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-      - main
-      - releases/v*
+    - main
+    - releases/v*
   pull_request:
     types:
-      - opened
-      - synchronize
-      - reopened
-      - ready_for_review
-  schedule:
-    - cron: '0 5 * * *'
+    - opened
+    - synchronize
+    - reopened
+    - ready_for_review
   workflow_dispatch: {}
 jobs:
   resolve-environment-action:
     strategy:
-      fail-fast: false
       matrix:
         include:
-          - os: ubuntu-latest
-            version: default
-          - os: macos-latest
-            version: default
-          - os: windows-latest
-            version: default
-          - os: ubuntu-latest
-            version: linked
-          - os: macos-latest
-            version: linked
-          - os: windows-latest
-            version: linked
-          - os: ubuntu-latest
-            version: nightly-latest
-          - os: macos-latest
-            version: nightly-latest
-          - os: windows-latest
-            version: nightly-latest
+        - os: ubuntu-latest
+          version: stable-v2.13.4
+        - os: macos-latest
+          version: stable-v2.13.4
+        - os: windows-latest
+          version: stable-v2.13.4
+        - os: ubuntu-latest
+          version: default
+        - os: macos-latest
+          version: default
+        - os: windows-latest
+          version: default
+        - os: ubuntu-latest
+          version: latest
+        - os: macos-latest
+          version: latest
+        - os: windows-latest
+          version: latest
+        - os: ubuntu-latest
+          version: nightly-latest
+        - os: macos-latest
+          version: nightly-latest
+        - os: windows-latest
+          version: nightly-latest
     name: Resolve environment
     permissions:
       contents: read
-      security-events: read
+      security-events: write
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-      - name: Check out repository
-        uses: actions/checkout@v4
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - uses: ./../action/init
-        with:
-          languages: go,javascript-typescript
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
+    - name: Setup Python on MacOS
+      uses: actions/setup-python@v4
+      if: >-
+        matrix.os == 'macos-latest' && (
 
-      - name: Resolve environment for Go
-        uses: ./../action/resolve-environment
-        id: resolve-environment-go
-        with:
-          language: go
+        matrix.version == 'stable-20220908' ||
 
-      - name: Fail if Go configuration missing
-        if: (!fromJSON(steps.resolve-environment-go.outputs.environment).configuration.go)
-        run: exit 1
+        matrix.version == 'stable-20221211' ||
 
-      - name: Resolve environment for JavaScript/TypeScript
-        uses: ./../action/resolve-environment
-        id: resolve-environment-js
-        with:
-          language: javascript-typescript
+        matrix.version == 'stable-20230418' ||
 
-      - name: Fail if JavaScript/TypeScript configuration present
-        if:
-          fromJSON(steps.resolve-environment-js.outputs.environment).configuration.javascript
-        run: exit 1
+        matrix.version == 'stable-v2.13.5' ||
+
+        matrix.version == 'stable-v2.14.6')
+      with:
+        python-version: '3.11'
+    - name: Check out repository
+      uses: actions/checkout@v4
+    - name: Prepare test
+      id: prepare-test
+      uses: ./.github/actions/prepare-test
+      with:
+        version: ${{ matrix.version }}
+        use-all-platform-bundle: 'false'
+    - name: Set environment variable for Swift enablement
+      if: >-
+        runner.os != 'Windows' && (
+            matrix.version == '20220908' ||
+            matrix.version == '20221211'
+        )
+      shell: bash
+      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
+    - uses: ./../action/init
+      with:
+        languages: ${{ matrix.version == 'stable-v2.13.4' && 'go' || 'go,javascript-typescript'
+          }}
+        tools: ${{ steps.prepare-test.outputs.tools-url }}
+
+    - name: Resolve environment for Go
+      uses: ./../action/resolve-environment
+      id: resolve-environment-go
+      with:
+        language: go
+
+    - name: Fail if Go configuration missing
+      if: (!fromJSON(steps.resolve-environment-go.outputs.environment).configuration.go)
+      run: exit 1
+
+    - name: Resolve environment for JavaScript/TypeScript
+      if: matrix.version != 'stable-v2.13.4'
+      uses: ./../action/resolve-environment
+      id: resolve-environment-js
+      with:
+        language: javascript-typescript
+
+    - name: Fail if JavaScript/TypeScript configuration present
+      if: matrix.version != 'stable-v2.13.4' && 
+        fromJSON(steps.resolve-environment-js.outputs.environment).configuration.javascript
+      run: exit 1
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__rubocop-multi-language.yml

@@ -7,63 +7,84 @@ name: PR Check - RuboCop multi-language
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
+  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-      - main
-      - releases/v*
+    - main
+    - releases/v*
   pull_request:
     types:
-      - opened
-      - synchronize
-      - reopened
-      - ready_for_review
-  schedule:
-    - cron: '0 5 * * *'
+    - opened
+    - synchronize
+    - reopened
+    - ready_for_review
   workflow_dispatch: {}
 jobs:
   rubocop-multi-language:
     strategy:
-      fail-fast: false
       matrix:
         include:
-          - os: ubuntu-latest
-            version: default
+        - os: ubuntu-latest
+          version: default
     name: RuboCop multi-language
     permissions:
       contents: read
-      security-events: read
+      security-events: write
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-      - name: Check out repository
-        uses: actions/checkout@v4
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - name: Set up Ruby
-        uses: ruby/setup-ruby@472790540115ce5bd69d399a020189a8c87d641f # v1.247.0
-        with:
-          ruby-version: 2.6
-      - name: Install Code Scanning integration
-        shell: bash
-        run: bundle add code-scanning-rubocop --version 0.3.0 --skip-install
-      - name: Install dependencies
-        shell: bash
-        run: bundle install
-      - name: RuboCop run
-        shell: bash
-        run: |
-          bash -c "
-            bundle exec rubocop --require code_scanning --format CodeScanning::SarifFormatter -o rubocop.sarif
-            [[ $? -ne 2 ]]
-          "
-      - uses: ./../action/upload-sarif
-        with:
-          sarif_file: rubocop.sarif
+    - name: Setup Python on MacOS
+      uses: actions/setup-python@v4
+      if: >-
+        matrix.os == 'macos-latest' && (
+
+        matrix.version == 'stable-20220908' ||
+
+        matrix.version == 'stable-20221211' ||
+
+        matrix.version == 'stable-20230418' ||
+
+        matrix.version == 'stable-v2.13.5' ||
+
+        matrix.version == 'stable-v2.14.6')
+      with:
+        python-version: '3.11'
+    - name: Check out repository
+      uses: actions/checkout@v4
+    - name: Prepare test
+      id: prepare-test
+      uses: ./.github/actions/prepare-test
+      with:
+        version: ${{ matrix.version }}
+        use-all-platform-bundle: 'false'
+    - name: Set environment variable for Swift enablement
+      if: >-
+        runner.os != 'Windows' && (
+            matrix.version == '20220908' ||
+            matrix.version == '20221211'
+        )
+      shell: bash
+      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
+    - name: Set up Ruby
+      uses: ruby/setup-ruby@v1
+      with:
+        ruby-version: 2.6
+    - name: Install Code Scanning integration
+      shell: bash
+      run: bundle add code-scanning-rubocop --version 0.3.0 --skip-install
+    - name: Install dependencies
+      shell: bash
+      run: bundle install
+    - name: RuboCop run
+      shell: bash
+      run: |
+        bash -c "
+          bundle exec rubocop --require code_scanning --format CodeScanning::SarifFormatter -o rubocop.sarif
+          [[ $? -ne 2 ]]
+        "
+    - uses: ./../action/upload-sarif
+      with:
+        sarif_file: rubocop.sarif
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__ruby.yml

@@ -7,69 +7,90 @@ name: PR Check - Ruby analysis
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
+  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-      - main
-      - releases/v*
+    - main
+    - releases/v*
   pull_request:
     types:
-      - opened
-      - synchronize
-      - reopened
-      - ready_for_review
-  schedule:
-    - cron: '0 5 * * *'
+    - opened
+    - synchronize
+    - reopened
+    - ready_for_review
   workflow_dispatch: {}
 jobs:
   ruby:
     strategy:
-      fail-fast: false
       matrix:
         include:
-          - os: ubuntu-latest
-            version: linked
-          - os: macos-latest
-            version: linked
-          - os: ubuntu-latest
-            version: default
-          - os: macos-latest
-            version: default
-          - os: ubuntu-latest
-            version: nightly-latest
-          - os: macos-latest
-            version: nightly-latest
+        - os: ubuntu-latest
+          version: latest
+        - os: macos-latest
+          version: latest
+        - os: ubuntu-latest
+          version: default
+        - os: macos-latest
+          version: default
+        - os: ubuntu-latest
+          version: nightly-latest
+        - os: macos-latest
+          version: nightly-latest
     name: Ruby analysis
     permissions:
       contents: read
-      security-events: read
+      security-events: write
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-      - name: Check out repository
-        uses: actions/checkout@v4
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - uses: ./../action/init
-        with:
-          languages: ruby
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-      - uses: ./../action/analyze
-        id: analysis
-        with:
-          upload-database: false
-      - name: Check database
-        shell: bash
-        run: |
-          RUBY_DB="${{ fromJson(steps.analysis.outputs.db-locations).ruby }}"
-          if [[ ! -d "$RUBY_DB" ]]; then
-            echo "Did not create a database for Ruby."
-            exit 1
-          fi
+    - name: Setup Python on MacOS
+      uses: actions/setup-python@v4
+      if: >-
+        matrix.os == 'macos-latest' && (
+
+        matrix.version == 'stable-20220908' ||
+
+        matrix.version == 'stable-20221211' ||
+
+        matrix.version == 'stable-20230418' ||
+
+        matrix.version == 'stable-v2.13.5' ||
+
+        matrix.version == 'stable-v2.14.6')
+      with:
+        python-version: '3.11'
+    - name: Check out repository
+      uses: actions/checkout@v4
+    - name: Prepare test
+      id: prepare-test
+      uses: ./.github/actions/prepare-test
+      with:
+        version: ${{ matrix.version }}
+        use-all-platform-bundle: 'false'
+    - name: Set environment variable for Swift enablement
+      if: >-
+        runner.os != 'Windows' && (
+            matrix.version == '20220908' ||
+            matrix.version == '20221211'
+        )
+      shell: bash
+      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
+    - uses: ./../action/init
+      with:
+        languages: ruby
+        tools: ${{ steps.prepare-test.outputs.tools-url }}
+    - uses: ./../action/analyze
+      id: analysis
+      with:
+        upload-database: false
+    - name: Check database
+      shell: bash
+      run: |
+        RUBY_DB="${{ fromJson(steps.analysis.outputs.db-locations).ruby }}"
+        if [[ ! -d "$RUBY_DB" ]]; then
+          echo "Did not create a database for Ruby."
+          exit 1
+        fi
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__rust.yml

@@ -1,71 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     (cd pr-checks; pip install ruamel.yaml@0.17.31 && python3 sync.py)
-# to regenerate this file.
-
-name: PR Check - Rust analysis
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request:
-    types:
-      - opened
-      - synchronize
-      - reopened
-      - ready_for_review
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch: {}
-jobs:
-  rust:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: ubuntu-latest
-            version: linked
-          - os: ubuntu-latest
-            version: default
-          - os: ubuntu-latest
-            version: nightly-latest
-    name: Rust analysis
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@v4
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - uses: ./../action/init
-        with:
-          languages: rust
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-        env:
-          CODEQL_ACTION_RUST_ANALYSIS: true
-      - uses: ./../action/analyze
-        id: analysis
-        with:
-          upload-database: false
-      - name: Check database
-        shell: bash
-        run: |
-          RUST_DB="${{ fromJson(steps.analysis.outputs.db-locations).rust }}"
-          if [[ ! -d "$RUST_DB" ]]; then
-            echo "Did not create a database for Rust."
-            exit 1
-          fi
-    env:
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__scaling-reserved-ram.yml

@@ -0,0 +1,119 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     (cd pr-checks; pip install ruamel.yaml@0.17.31 && python3 sync.py)
+# to regenerate this file.
+
+name: PR Check - Scaling reserved RAM
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
+on:
+  push:
+    branches:
+    - main
+    - releases/v*
+  pull_request:
+    types:
+    - opened
+    - synchronize
+    - reopened
+    - ready_for_review
+  workflow_dispatch: {}
+jobs:
+  scaling-reserved-ram:
+    strategy:
+      matrix:
+        include:
+        - os: ubuntu-latest
+          version: stable-20220908
+        - os: macos-latest
+          version: stable-20220908
+        - os: ubuntu-latest
+          version: stable-20221211
+        - os: macos-latest
+          version: stable-20221211
+        - os: ubuntu-latest
+          version: stable-20230418
+        - os: macos-latest
+          version: stable-20230418
+        - os: ubuntu-latest
+          version: stable-v2.13.5
+        - os: macos-latest
+          version: stable-v2.13.5
+        - os: ubuntu-latest
+          version: stable-v2.14.6
+        - os: macos-latest
+          version: stable-v2.14.6
+        - os: ubuntu-latest
+          version: default
+        - os: macos-latest
+          version: default
+        - os: ubuntu-latest
+          version: latest
+        - os: macos-latest
+          version: latest
+        - os: ubuntu-latest
+          version: nightly-latest
+        - os: macos-latest
+          version: nightly-latest
+    name: Scaling reserved RAM
+    permissions:
+      contents: read
+      security-events: write
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+    - name: Setup Python on MacOS
+      uses: actions/setup-python@v4
+      if: >-
+        matrix.os == 'macos-latest' && (
+
+        matrix.version == 'stable-20220908' ||
+
+        matrix.version == 'stable-20221211' ||
+
+        matrix.version == 'stable-20230418' ||
+
+        matrix.version == 'stable-v2.13.5' ||
+
+        matrix.version == 'stable-v2.14.6')
+      with:
+        python-version: '3.11'
+    - name: Check out repository
+      uses: actions/checkout@v4
+    - name: Prepare test
+      id: prepare-test
+      uses: ./.github/actions/prepare-test
+      with:
+        version: ${{ matrix.version }}
+        use-all-platform-bundle: 'false'
+    - name: Set environment variable for Swift enablement
+      if: >-
+        runner.os != 'Windows' && (
+            matrix.version == '20220908' ||
+            matrix.version == '20221211'
+        )
+      shell: bash
+      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
+    - uses: ./../action/init
+      id: init
+      with:
+        db-location: ${{ runner.temp }}/customDbLocation
+        tools: ${{ steps.prepare-test.outputs.tools-url }}
+
+    - uses: ./../action/.github/actions/setup-swift
+      with:
+        codeql-path: ${{ steps.init.outputs.codeql-path }}
+
+    - name: Build code
+      shell: bash
+      run: ./build.sh
+
+    - uses: ./../action/analyze
+      id: analysis
+      with:
+        upload-database: false
+    env:
+      CODEQL_ACTION_SCALING_RESERVED_RAM: true
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__split-workflow.yml

@@ -7,98 +7,114 @@ name: PR Check - Split workflow
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
+  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-      - main
-      - releases/v*
+    - main
+    - releases/v*
   pull_request:
     types:
-      - opened
-      - synchronize
-      - reopened
-      - ready_for_review
-  schedule:
-    - cron: '0 5 * * *'
+    - opened
+    - synchronize
+    - reopened
+    - ready_for_review
   workflow_dispatch: {}
 jobs:
   split-workflow:
     strategy:
-      fail-fast: false
       matrix:
         include:
-          - os: ubuntu-latest
-            version: linked
-          - os: macos-latest
-            version: linked
-          - os: ubuntu-latest
-            version: default
-          - os: macos-latest
-            version: default
-          - os: ubuntu-latest
-            version: nightly-latest
-          - os: macos-latest
-            version: nightly-latest
+        - os: ubuntu-latest
+          version: latest
+        - os: macos-latest
+          version: latest
+        - os: ubuntu-latest
+          version: default
+        - os: macos-latest
+          version: default
+        - os: ubuntu-latest
+          version: nightly-latest
+        - os: macos-latest
+          version: nightly-latest
     name: Split workflow
     permissions:
       contents: read
-      security-events: read
+      security-events: write
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-      - name: Check out repository
-        uses: actions/checkout@v4
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - name: Install Go
-        uses: actions/setup-go@v5
-        with:
-          go-version: '>=1.21.0'
-          cache: false
-      - uses: ./../action/init
-        with:
-          config-file: .github/codeql/codeql-config-packaging3.yml
-          packs: +codeql-testing/codeql-pack1@1.0.0
-          languages: javascript
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-      - name: Build code
-        shell: bash
-        run: ./build.sh
-      - uses: ./../action/analyze
-        with:
-          skip-queries: true
-          output: ${{ runner.temp }}/results
-          upload-database: false
+    - name: Setup Python on MacOS
+      uses: actions/setup-python@v4
+      if: >-
+        matrix.os == 'macos-latest' && (
 
-      - name: Assert No Results
-        shell: bash
-        run: |
-          if [ "$(ls -A $RUNNER_TEMP/results)" ]; then
-            echo "Expected results directory to be empty after skipping query execution!"
-            exit 1
-          fi
-      - uses: ./../action/analyze
-        with:
-          output: ${{ runner.temp }}/results
-          upload-database: false
-      - name: Assert Results
-        shell: bash
-        run: |
-          cd "$RUNNER_TEMP/results"
-          # We should have 4 hits from these rules
-          EXPECTED_RULES="javascript/example/empty-or-one-block javascript/example/empty-or-one-block javascript/example/other-query-block javascript/example/two-block"
+        matrix.version == 'stable-20220908' ||
 
-          # use tr to replace newlines with spaces and xargs to trim leading and trailing whitespace
-          RULES="$(cat javascript.sarif | jq -r '.runs[0].results[].ruleId' | sort | tr "\n\r" " " | xargs)"
-          echo "Found matching rules '$RULES'"
-          if [ "$RULES" != "$EXPECTED_RULES" ]; then
-            echo "Did not match expected rules '$EXPECTED_RULES'."
-            exit 1
-          fi
+        matrix.version == 'stable-20221211' ||
+
+        matrix.version == 'stable-20230418' ||
+
+        matrix.version == 'stable-v2.13.5' ||
+
+        matrix.version == 'stable-v2.14.6')
+      with:
+        python-version: '3.11'
+    - name: Check out repository
+      uses: actions/checkout@v4
+    - name: Prepare test
+      id: prepare-test
+      uses: ./.github/actions/prepare-test
+      with:
+        version: ${{ matrix.version }}
+        use-all-platform-bundle: 'false'
+    - name: Set environment variable for Swift enablement
+      if: >-
+        runner.os != 'Windows' && (
+            matrix.version == '20220908' ||
+            matrix.version == '20221211'
+        )
+      shell: bash
+      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
+    - uses: ./../action/init
+      with:
+        config-file: .github/codeql/codeql-config-packaging3.yml
+        packs: +codeql-testing/codeql-pack1@1.0.0
+        languages: javascript
+        tools: ${{ steps.prepare-test.outputs.tools-url }}
+    - name: Build code
+      shell: bash
+      run: ./build.sh
+    - uses: ./../action/analyze
+      with:
+        skip-queries: true
+        output: ${{ runner.temp }}/results
+        upload-database: false
+
+    - name: Assert No Results
+      shell: bash
+      run: |
+        if [ "$(ls -A $RUNNER_TEMP/results)" ]; then
+          echo "Expected results directory to be empty after skipping query execution!"
+          exit 1
+        fi
+    - uses: ./../action/analyze
+      with:
+        output: ${{ runner.temp }}/results
+        upload-database: false
+    - name: Assert Results
+      shell: bash
+      run: |
+        cd "$RUNNER_TEMP/results"
+        # We should have 4 hits from these rules
+        EXPECTED_RULES="javascript/example/empty-or-one-block javascript/example/empty-or-one-block javascript/example/other-query-block javascript/example/two-block"
+
+        # use tr to replace newlines with spaces and xargs to trim leading and trailing whitespace
+        RULES="$(cat javascript.sarif | jq -r '.runs[0].results[].ruleId' | sort | tr "\n\r" " " | xargs)"
+        echo "Found matching rules '$RULES'"
+        if [ "$RULES" != "$EXPECTED_RULES" ]; then
+          echo "Did not match expected rules '$EXPECTED_RULES'."
+          exit 1
+        fi
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__start-proxy.yml

@@ -1,75 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     (cd pr-checks; pip install ruamel.yaml@0.17.31 && python3 sync.py)
-# to regenerate this file.
-
-name: PR Check - Start proxy
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request:
-    types:
-      - opened
-      - synchronize
-      - reopened
-      - ready_for_review
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch: {}
-jobs:
-  start-proxy:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: ubuntu-latest
-            version: linked
-          - os: macos-latest
-            version: linked
-          - os: windows-latest
-            version: linked
-    name: Start proxy
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@v4
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - uses: ./../action/init
-        with:
-          languages: csharp
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-
-      - name: Setup proxy for registries
-        id: proxy
-        uses: ./../action/start-proxy
-        with:
-          registry_secrets: '[{ "type": "nuget_feed", "url": "https://api.nuget.org/v3/index.json"
-            }]'
-
-      - name: Print proxy outputs
-        run: |
-          echo "${{ steps.proxy.outputs.proxy_host }}"
-          echo "${{ steps.proxy.outputs.proxy_port }}"
-          echo "${{ steps.proxy.outputs.proxy_urls }}"
-
-      - name: Fail if proxy outputs are not set
-        if: (!steps.proxy.outputs.proxy_host) || (!steps.proxy.outputs.proxy_port)
-          || (!steps.proxy.outputs.proxy_ca_certificate) || (!steps.proxy.outputs.proxy_urls)
-        run: exit 1
-    env:
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__submit-sarif-failure.yml

@@ -7,67 +7,86 @@ name: PR Check - Submit SARIF after failure
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
+  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-      - main
-      - releases/v*
+    - main
+    - releases/v*
   pull_request:
     types:
-      - opened
-      - synchronize
-      - reopened
-      - ready_for_review
-  schedule:
-    - cron: '0 5 * * *'
+    - opened
+    - synchronize
+    - reopened
+    - ready_for_review
   workflow_dispatch: {}
 jobs:
   submit-sarif-failure:
     strategy:
-      fail-fast: false
       matrix:
         include:
-          - os: ubuntu-latest
-            version: linked
-          - os: ubuntu-latest
-            version: default
-          - os: ubuntu-latest
-            version: nightly-latest
+        - os: ubuntu-latest
+          version: latest
+        - os: ubuntu-latest
+          version: default
+        - os: ubuntu-latest
+          version: nightly-latest
     name: Submit SARIF after failure
     permissions:
       contents: read
-      security-events: write # needed to upload the SARIF file
-
+      security-events: write
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-      - name: Check out repository
-        uses: actions/checkout@v4
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - uses: actions/checkout@v4
-      - uses: ./init
-        with:
-          languages: javascript
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-      - name: Fail
+    - name: Setup Python on MacOS
+      uses: actions/setup-python@v4
+      if: >-
+        matrix.os == 'macos-latest' && (
+
+        matrix.version == 'stable-20220908' ||
+
+        matrix.version == 'stable-20221211' ||
+
+        matrix.version == 'stable-20230418' ||
+
+        matrix.version == 'stable-v2.13.5' ||
+
+        matrix.version == 'stable-v2.14.6')
+      with:
+        python-version: '3.11'
+    - name: Check out repository
+      uses: actions/checkout@v4
+    - name: Prepare test
+      id: prepare-test
+      uses: ./.github/actions/prepare-test
+      with:
+        version: ${{ matrix.version }}
+        use-all-platform-bundle: 'false'
+    - name: Set environment variable for Swift enablement
+      if: >-
+        runner.os != 'Windows' && (
+            matrix.version == '20220908' ||
+            matrix.version == '20221211'
+        )
+      shell: bash
+      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
+    - uses: actions/checkout@v4
+    - uses: ./init
+      with:
+        languages: javascript
+    - name: Fail
     # We want this job to pass if the Action correctly uploads the SARIF file for
     # the failed run.
     # Setting this step to continue on error means that it is marked as completing
     # successfully, so will not fail the job.
-        continue-on-error: true
-        run: exit 1
-      - uses: ./analyze
+      continue-on-error: true
+      run: exit 1
+    - uses: ./analyze
     # In a real workflow, this step wouldn't run. Since we used `continue-on-error`
     # above, we manually disable it with an `if` condition.
-        if: false
-        with:
-          category: /test-codeql-version:${{ matrix.version }}
+      if: false
+      with:
+        category: /test-codeql-version:${{ matrix.version }}
     env:
   # Internal-only environment variable used to indicate that the post-init Action
   # should expect to upload a SARIF file for the failed run.

.github/workflows/__swift-autobuild.yml

@@ -1,75 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     (cd pr-checks; pip install ruamel.yaml@0.17.31 && python3 sync.py)
-# to regenerate this file.
-
-name: PR Check - Swift analysis using autobuild
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request:
-    types:
-      - opened
-      - synchronize
-      - reopened
-      - ready_for_review
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch: {}
-jobs:
-  swift-autobuild:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: macos-latest
-            version: nightly-latest
-    name: Swift analysis using autobuild
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@v4
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - uses: ./../action/init
-        id: init
-        with:
-          languages: swift
-          build-mode: autobuild
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-      - uses: ./../action/.github/actions/setup-swift
-        with:
-          codeql-path: ${{steps.init.outputs.codeql-path}}
-      - name: Check working directory
-        shell: bash
-        run: pwd
-      - uses: ./../action/autobuild
-        timeout-minutes: 30
-      - uses: ./../action/analyze
-        id: analysis
-        with:
-          upload-database: false
-      - name: Check database
-        shell: bash
-        run: |
-          SWIFT_DB="${{ fromJson(steps.analysis.outputs.db-locations).swift }}"
-          if [[ ! -d "$SWIFT_DB" ]]; then
-            echo "Did not create a database for Swift."
-            exit 1
-          fi
-    env:
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__swift-custom-build.yml

@@ -7,79 +7,101 @@ name: PR Check - Swift analysis using a custom build command
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
+  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-      - main
-      - releases/v*
+    - main
+    - releases/v*
   pull_request:
     types:
-      - opened
-      - synchronize
-      - reopened
-      - ready_for_review
-  schedule:
-    - cron: '0 5 * * *'
+    - opened
+    - synchronize
+    - reopened
+    - ready_for_review
   workflow_dispatch: {}
 jobs:
   swift-custom-build:
     strategy:
-      fail-fast: false
       matrix:
         include:
-          - os: macos-latest
-            version: linked
-          - os: macos-latest
-            version: default
-          - os: macos-latest
-            version: nightly-latest
+        - os: ubuntu-latest
+          version: latest
+        - os: macos-latest
+          version: latest
+        - os: ubuntu-latest
+          version: default
+        - os: macos-latest
+          version: default
+        - os: ubuntu-latest
+          version: nightly-latest
+        - os: macos-latest
+          version: nightly-latest
     name: Swift analysis using a custom build command
     permissions:
       contents: read
-      security-events: read
+      security-events: write
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-      - name: Check out repository
-        uses: actions/checkout@v4
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - name: Install Go
-        uses: actions/setup-go@v5
-        with:
-          go-version: '>=1.21.0'
-          cache: false
-      - uses: ./../action/init
-        id: init
-        with:
-          languages: swift
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-      - uses: ./../action/.github/actions/setup-swift
-        with:
-          codeql-path: ${{steps.init.outputs.codeql-path}}
-      - name: Check working directory
-        shell: bash
-        run: pwd
-      - name: Build code
-        shell: bash
-        run: ./build.sh
-      - uses: ./../action/analyze
-        id: analysis
-        with:
-          upload-database: false
-      - name: Check database
-        shell: bash
-        run: |
-          SWIFT_DB="${{ fromJson(steps.analysis.outputs.db-locations).swift }}"
-          if [[ ! -d "$SWIFT_DB" ]]; then
-            echo "Did not create a database for Swift."
-            exit 1
-          fi
+    - name: Setup Python on MacOS
+      uses: actions/setup-python@v4
+      if: >-
+        matrix.os == 'macos-latest' && (
+
+        matrix.version == 'stable-20220908' ||
+
+        matrix.version == 'stable-20221211' ||
+
+        matrix.version == 'stable-20230418' ||
+
+        matrix.version == 'stable-v2.13.5' ||
+
+        matrix.version == 'stable-v2.14.6')
+      with:
+        python-version: '3.11'
+    - name: Check out repository
+      uses: actions/checkout@v4
+    - name: Prepare test
+      id: prepare-test
+      uses: ./.github/actions/prepare-test
+      with:
+        version: ${{ matrix.version }}
+        use-all-platform-bundle: 'false'
+    - name: Set environment variable for Swift enablement
+      if: >-
+        runner.os != 'Windows' && (
+            matrix.version == '20220908' ||
+            matrix.version == '20221211'
+        )
+      shell: bash
+      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
+    - uses: ./../action/init
+      id: init
+      with:
+        languages: swift
+        tools: ${{ steps.prepare-test.outputs.tools-url }}
+    - uses: ./../action/.github/actions/setup-swift
+      with:
+        codeql-path: ${{steps.init.outputs.codeql-path}}
+    - name: Check working directory
+      shell: bash
+      run: pwd
+    - name: Build code
+      shell: bash
+      run: ./build.sh
+    - uses: ./../action/analyze
+      id: analysis
+      with:
+        upload-database: false
+    - name: Check database
+      shell: bash
+      run: |
+        SWIFT_DB="${{ fromJson(steps.analysis.outputs.db-locations).swift }}"
+        if [[ ! -d "$SWIFT_DB" ]]; then
+          echo "Did not create a database for Swift."
+          exit 1
+        fi
     env:
       DOTNET_GENERATE_ASPNET_CERTIFICATE: 'false'
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__test-autobuild-working-dir.yml

@@ -7,66 +7,89 @@ name: PR Check - Autobuild working directory
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
+  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-      - main
-      - releases/v*
+    - main
+    - releases/v*
   pull_request:
     types:
-      - opened
-      - synchronize
-      - reopened
-      - ready_for_review
-  schedule:
-    - cron: '0 5 * * *'
+    - opened
+    - synchronize
+    - reopened
+    - ready_for_review
   workflow_dispatch: {}
 jobs:
   test-autobuild-working-dir:
     strategy:
-      fail-fast: false
       matrix:
         include:
-          - os: ubuntu-latest
-            version: linked
+        - os: ubuntu-latest
+          version: latest
     name: Autobuild working directory
     permissions:
       contents: read
-      security-events: read
+      security-events: write
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-      - name: Check out repository
-        uses: actions/checkout@v4
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - name: Test setup
-        shell: bash
-        run: |
-          # Make sure that Gradle build succeeds in autobuild-dir ...
-          cp -a ../action/tests/java-repo autobuild-dir
-          # ... and fails if attempted in the current directory
-          echo > build.gradle
-      - uses: ./../action/init
-        with:
-          languages: java
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-      - uses: ./../action/autobuild
-        with:
-          working-directory: autobuild-dir
-      - uses: ./../action/analyze
-      - name: Check database
-        shell: bash
-        run: |
-          cd "$RUNNER_TEMP/codeql_databases"
-          if [[ ! -d java ]]; then
-            echo "Did not find a Java database"
-            exit 1
-          fi
+    - name: Setup Python on MacOS
+      uses: actions/setup-python@v4
+      if: >-
+        matrix.os == 'macos-latest' && (
+
+        matrix.version == 'stable-20220908' ||
+
+        matrix.version == 'stable-20221211' ||
+
+        matrix.version == 'stable-20230418' ||
+
+        matrix.version == 'stable-v2.13.5' ||
+
+        matrix.version == 'stable-v2.14.6')
+      with:
+        python-version: '3.11'
+    - name: Check out repository
+      uses: actions/checkout@v4
+    - name: Prepare test
+      id: prepare-test
+      uses: ./.github/actions/prepare-test
+      with:
+        version: ${{ matrix.version }}
+        use-all-platform-bundle: 'false'
+    - name: Set environment variable for Swift enablement
+      if: >-
+        runner.os != 'Windows' && (
+            matrix.version == '20220908' ||
+            matrix.version == '20221211'
+        )
+      shell: bash
+      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
+    - name: Test setup
+      shell: bash
+      run: |
+        # Make sure that Gradle build succeeds in autobuild-dir ...
+        cp -a ../action/tests/java-repo autobuild-dir
+        # ... and fails if attempted in the current directory
+        echo > build.gradle
+    - uses: ./../action/init
+      with:
+        languages: java
+        tools: ${{ steps.prepare-test.outputs.tools-url }}
+    - uses: ./../action/autobuild
+      with:
+        working-directory: autobuild-dir
+    - uses: ./../action/analyze
+      with:
+        upload-database: false
+    - name: Check database
+      shell: bash
+      run: |
+        cd "$RUNNER_TEMP/codeql_databases"
+        if [[ ! -d java ]]; then
+          echo "Did not find a Java database"
+          exit 1
+        fi
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__test-local-codeql.yml

@@ -7,64 +7,83 @@ name: PR Check - Local CodeQL bundle
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
+  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-      - main
-      - releases/v*
+    - main
+    - releases/v*
   pull_request:
     types:
-      - opened
-      - synchronize
-      - reopened
-      - ready_for_review
-  schedule:
-    - cron: '0 5 * * *'
+    - opened
+    - synchronize
+    - reopened
+    - ready_for_review
   workflow_dispatch: {}
 jobs:
   test-local-codeql:
     strategy:
-      fail-fast: false
       matrix:
         include:
-          - os: ubuntu-latest
-            version: nightly-latest
+        - os: ubuntu-latest
+          version: nightly-latest
     name: Local CodeQL bundle
     permissions:
       contents: read
-      security-events: read
+      security-events: write
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-      - name: Check out repository
-        uses: actions/checkout@v4
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - name: Install Go
-        uses: actions/setup-go@v5
-        with:
-          go-version: '>=1.21.0'
-          cache: false
-      - name: Fetch a CodeQL bundle
-        shell: bash
-        env:
-          CODEQL_URL: ${{ steps.prepare-test.outputs.tools-url }}
-        run: |
-          wget "$CODEQL_URL"
-      - id: init
-        uses: ./../action/init
-        with:
-      # Swift is not supported on Ubuntu so we manually exclude it from the list here
-          languages: cpp,csharp,go,java,javascript,python,ruby
-          tools: ./codeql-bundle-linux64.tar.zst
-      - name: Build code
-        shell: bash
-        run: ./build.sh
-      - uses: ./../action/analyze
+    - name: Setup Python on MacOS
+      uses: actions/setup-python@v4
+      if: >-
+        matrix.os == 'macos-latest' && (
+
+        matrix.version == 'stable-20220908' ||
+
+        matrix.version == 'stable-20221211' ||
+
+        matrix.version == 'stable-20230418' ||
+
+        matrix.version == 'stable-v2.13.5' ||
+
+        matrix.version == 'stable-v2.14.6')
+      with:
+        python-version: '3.11'
+    - name: Check out repository
+      uses: actions/checkout@v4
+    - name: Prepare test
+      id: prepare-test
+      uses: ./.github/actions/prepare-test
+      with:
+        version: ${{ matrix.version }}
+        use-all-platform-bundle: 'false'
+    - name: Set environment variable for Swift enablement
+      if: >-
+        runner.os != 'Windows' && (
+            matrix.version == '20220908' ||
+            matrix.version == '20221211'
+        )
+      shell: bash
+      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
+    - name: Fetch a CodeQL bundle
+      shell: bash
+      env:
+        CODEQL_URL: ${{ steps.prepare-test.outputs.tools-url }}
+      run: |
+        wget "$CODEQL_URL"
+    - id: init
+      uses: ./../action/init
+      with:
+        tools: ./codeql-bundle-linux64.tar.gz
+    - uses: ./../action/.github/actions/setup-swift
+      with:
+        codeql-path: ${{ steps.init.outputs.codeql-path }}
+    - name: Build code
+      shell: bash
+      run: ./build.sh
+    - uses: ./../action/analyze
+      with:
+        upload-database: false
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__test-proxy.yml

@@ -7,70 +7,80 @@ name: PR Check - Proxy test
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
+  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-      - main
-      - releases/v*
+    - main
+    - releases/v*
   pull_request:
     types:
-      - opened
-      - synchronize
-      - reopened
-      - ready_for_review
-  schedule:
-    - cron: '0 5 * * *'
+    - opened
+    - synchronize
+    - reopened
+    - ready_for_review
   workflow_dispatch: {}
 jobs:
   test-proxy:
     strategy:
-      fail-fast: false
       matrix:
         include:
-          - os: ubuntu-latest
-            version: linked
-          - os: ubuntu-latest
-            version: nightly-latest
+        - os: ubuntu-latest
+          version: latest
     name: Proxy test
     permissions:
       contents: read
-      security-events: read
+      security-events: write
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-  # These steps are required to initialise the `gh` cli in a container that doesn't
-  # come pre-installed with it. The reason for that is that this is later
-  # needed by the `prepare-test` workflow to find the latest release of CodeQL.
-      - name: Set up GitHub CLI
-        run: |
-          apt update
-          apt install -y curl libreadline8 gnupg2 software-properties-common zstd
-          curl -fsSL https://cli.github.com/packages/githubcli-archive-keyring.gpg | dd of=/usr/share/keyrings/githubcli-archive-keyring.gpg
-          apt-key add /usr/share/keyrings/githubcli-archive-keyring.gpg
-          apt-add-repository https://cli.github.com/packages
-          apt install -y gh
-        env: {}
-      - name: Check out repository
-        uses: actions/checkout@v4
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'false'
-      - uses: ./../action/init
-        with:
-          languages: javascript
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-      - uses: ./../action/analyze
+    - name: Setup Python on MacOS
+      uses: actions/setup-python@v4
+      if: >-
+        matrix.os == 'macos-latest' && (
+
+        matrix.version == 'stable-20220908' ||
+
+        matrix.version == 'stable-20221211' ||
+
+        matrix.version == 'stable-20230418' ||
+
+        matrix.version == 'stable-v2.13.5' ||
+
+        matrix.version == 'stable-v2.14.6')
+      with:
+        python-version: '3.11'
+    - name: Check out repository
+      uses: actions/checkout@v4
+    - name: Prepare test
+      id: prepare-test
+      uses: ./.github/actions/prepare-test
+      with:
+        version: ${{ matrix.version }}
+        use-all-platform-bundle: 'false'
+    - name: Set environment variable for Swift enablement
+      if: >-
+        runner.os != 'Windows' && (
+            matrix.version == '20220908' ||
+            matrix.version == '20221211'
+        )
+      shell: bash
+      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
+    - uses: ./../action/init
+      with:
+        languages: javascript
+        tools: ${{ steps.prepare-test.outputs.tools-url }}
+    - uses: ./../action/analyze
+      with:
+        upload-database: false
     env:
       https_proxy: http://squid-proxy:3128
       CODEQL_ACTION_TEST_MODE: true
     container:
       image: ubuntu:22.04
+      options: --dns 127.0.0.1
     services:
       squid-proxy:
         image: ubuntu/squid:latest
         ports:
-          - 3128:3128
+        - 3128:3128

.github/workflows/__unset-environment.yml

@@ -7,102 +7,134 @@ name: PR Check - Test unsetting environment variables
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
+  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-      - main
-      - releases/v*
+    - main
+    - releases/v*
   pull_request:
     types:
-      - opened
-      - synchronize
-      - reopened
-      - ready_for_review
-  schedule:
-    - cron: '0 5 * * *'
+    - opened
+    - synchronize
+    - reopened
+    - ready_for_review
   workflow_dispatch: {}
 jobs:
   unset-environment:
     strategy:
-      fail-fast: false
       matrix:
         include:
-          - os: ubuntu-latest
-            version: linked
-          - os: ubuntu-latest
-            version: nightly-latest
+        - os: ubuntu-latest
+          version: stable-20220908
+        - os: ubuntu-latest
+          version: stable-20221211
+        - os: ubuntu-latest
+          version: stable-20230418
+        - os: ubuntu-latest
+          version: stable-v2.13.5
+        - os: ubuntu-latest
+          version: stable-v2.14.6
+        - os: ubuntu-latest
+          version: default
+        - os: ubuntu-latest
+          version: latest
+        - os: ubuntu-latest
+          version: nightly-latest
     name: Test unsetting environment variables
     permissions:
       contents: read
-      security-events: read
+      security-events: write
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-      - name: Check out repository
-        uses: actions/checkout@v4
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - name: Install Go
-        uses: actions/setup-go@v5
-        with:
-          go-version: '>=1.21.0'
-          cache: false
-      - uses: ./../action/init
-        id: init
-        with:
-          db-location: ${{ runner.temp }}/customDbLocation
-      # Swift is not supported on Ubuntu so we manually exclude it from the list here
-          languages: cpp,csharp,go,java,javascript,python,ruby
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-      - name: Build code
-        shell: bash
-        run: env -i PATH="$PATH" HOME="$HOME" ./build.sh
-      - uses: ./../action/analyze
-        id: analysis
-        with:
-          upload-database: false
-      - shell: bash
-        run: |
-          CPP_DB="${{ fromJson(steps.analysis.outputs.db-locations).cpp }}"
-          if [[ ! -d "$CPP_DB" ]] || [[ ! "$CPP_DB" == "${RUNNER_TEMP}/customDbLocation/cpp" ]]; then
-            echo "::error::Did not create a database for CPP, or created it in the wrong location." \
-              "Expected location was '${RUNNER_TEMP}/customDbLocation/cpp' but actual was '${CPP_DB}'"
-            exit 1
-          fi
-          CSHARP_DB="${{ fromJson(steps.analysis.outputs.db-locations).csharp }}"
-          if [[ ! -d "$CSHARP_DB" ]] || [[ ! "$CSHARP_DB" == "${RUNNER_TEMP}/customDbLocation/csharp" ]]; then
-            echo "::error::Did not create a database for C Sharp, or created it in the wrong location." \
-              "Expected location was '${RUNNER_TEMP}/customDbLocation/csharp' but actual was '${CSHARP_DB}'"
-            exit 1
-          fi
-          GO_DB="${{ fromJson(steps.analysis.outputs.db-locations).go }}"
-          if [[ ! -d "$GO_DB" ]] || [[ ! "$GO_DB" == "${RUNNER_TEMP}/customDbLocation/go" ]]; then
-            echo "::error::Did not create a database for Go, or created it in the wrong location." \
-              "Expected location was '${RUNNER_TEMP}/customDbLocation/go' but actual was '${GO_DB}'"
-            exit 1
-          fi
-          JAVA_DB="${{ fromJson(steps.analysis.outputs.db-locations).java }}"
-          if [[ ! -d "$JAVA_DB" ]] || [[ ! "$JAVA_DB" == "${RUNNER_TEMP}/customDbLocation/java" ]]; then
-            echo "::error::Did not create a database for Java, or created it in the wrong location." \
-              "Expected location was '${RUNNER_TEMP}/customDbLocation/java' but actual was '${JAVA_DB}'"
-            exit 1
-          fi
-          JAVASCRIPT_DB="${{ fromJson(steps.analysis.outputs.db-locations).javascript }}"
-          if [[ ! -d "$JAVASCRIPT_DB" ]] || [[ ! "$JAVASCRIPT_DB" == "${RUNNER_TEMP}/customDbLocation/javascript" ]]; then
-            echo "::error::Did not create a database for Javascript, or created it in the wrong location." \
-              "Expected location was '${RUNNER_TEMP}/customDbLocation/javascript' but actual was '${JAVASCRIPT_DB}'"
-            exit 1
-          fi
-          PYTHON_DB="${{ fromJson(steps.analysis.outputs.db-locations).python }}"
-          if [[ ! -d "$PYTHON_DB" ]] || [[ ! "$PYTHON_DB" == "${RUNNER_TEMP}/customDbLocation/python" ]]; then
-            echo "::error::Did not create a database for Python, or created it in the wrong location." \
-              "Expected location was '${RUNNER_TEMP}/customDbLocation/python' but actual was '${PYTHON_DB}'"
-            exit 1
-          fi
+    - name: Setup Python on MacOS
+      uses: actions/setup-python@v4
+      if: >-
+        matrix.os == 'macos-latest' && (
+
+        matrix.version == 'stable-20220908' ||
+
+        matrix.version == 'stable-20221211' ||
+
+        matrix.version == 'stable-20230418' ||
+
+        matrix.version == 'stable-v2.13.5' ||
+
+        matrix.version == 'stable-v2.14.6')
+      with:
+        python-version: '3.11'
+    - name: Check out repository
+      uses: actions/checkout@v4
+    - name: Prepare test
+      id: prepare-test
+      uses: ./.github/actions/prepare-test
+      with:
+        version: ${{ matrix.version }}
+        use-all-platform-bundle: 'false'
+    - name: Set environment variable for Swift enablement
+      if: >-
+        runner.os != 'Windows' && (
+            matrix.version == '20220908' ||
+            matrix.version == '20221211'
+        )
+      shell: bash
+      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
+    - uses: ./../action/init
+      id: init
+      with:
+        db-location: ${{ runner.temp }}/customDbLocation
+        tools: ${{ steps.prepare-test.outputs.tools-url }}
+    - uses: ./../action/.github/actions/setup-swift
+      with:
+        codeql-path: ${{ steps.init.outputs.codeql-path }}
+    - name: Build code
+      shell: bash
+    # Disable Kotlin analysis while it's incompatible with Kotlin 1.8, until we find a
+    # workaround for our PR checks.
+      run: env -i CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN=true PATH="$PATH" HOME="$HOME"
+        ./build.sh
+    - uses: ./../action/analyze
+      id: analysis
+      with:
+        upload-database: false
+    - shell: bash
+      run: |
+        CPP_DB="${{ fromJson(steps.analysis.outputs.db-locations).cpp }}"
+        if [[ ! -d "$CPP_DB" ]] || [[ ! "$CPP_DB" == "${RUNNER_TEMP}/customDbLocation/cpp" ]]; then
+          echo "::error::Did not create a database for CPP, or created it in the wrong location." \
+            "Expected location was '${RUNNER_TEMP}/customDbLocation/cpp' but actual was '${CPP_DB}'"
+          exit 1
+        fi
+        CSHARP_DB="${{ fromJson(steps.analysis.outputs.db-locations).csharp }}"
+        if [[ ! -d "$CSHARP_DB" ]] || [[ ! "$CSHARP_DB" == "${RUNNER_TEMP}/customDbLocation/csharp" ]]; then
+          echo "::error::Did not create a database for C Sharp, or created it in the wrong location." \
+            "Expected location was '${RUNNER_TEMP}/customDbLocation/csharp' but actual was '${CSHARP_DB}'"
+          exit 1
+        fi
+        GO_DB="${{ fromJson(steps.analysis.outputs.db-locations).go }}"
+        if [[ ! -d "$GO_DB" ]] || [[ ! "$GO_DB" == "${RUNNER_TEMP}/customDbLocation/go" ]]; then
+          echo "::error::Did not create a database for Go, or created it in the wrong location." \
+            "Expected location was '${RUNNER_TEMP}/customDbLocation/go' but actual was '${GO_DB}'"
+          exit 1
+        fi
+        JAVA_DB="${{ fromJson(steps.analysis.outputs.db-locations).java }}"
+        if [[ ! -d "$JAVA_DB" ]] || [[ ! "$JAVA_DB" == "${RUNNER_TEMP}/customDbLocation/java" ]]; then
+          echo "::error::Did not create a database for Java, or created it in the wrong location." \
+            "Expected location was '${RUNNER_TEMP}/customDbLocation/java' but actual was '${JAVA_DB}'"
+          exit 1
+        fi
+        JAVASCRIPT_DB="${{ fromJson(steps.analysis.outputs.db-locations).javascript }}"
+        if [[ ! -d "$JAVASCRIPT_DB" ]] || [[ ! "$JAVASCRIPT_DB" == "${RUNNER_TEMP}/customDbLocation/javascript" ]]; then
+          echo "::error::Did not create a database for Javascript, or created it in the wrong location." \
+            "Expected location was '${RUNNER_TEMP}/customDbLocation/javascript' but actual was '${JAVASCRIPT_DB}'"
+          exit 1
+        fi
+        PYTHON_DB="${{ fromJson(steps.analysis.outputs.db-locations).python }}"
+        if [[ ! -d "$PYTHON_DB" ]] || [[ ! "$PYTHON_DB" == "${RUNNER_TEMP}/customDbLocation/python" ]]; then
+          echo "::error::Did not create a database for Python, or created it in the wrong location." \
+            "Expected location was '${RUNNER_TEMP}/customDbLocation/python' but actual was '${PYTHON_DB}'"
+          exit 1
+        fi
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__upload-quality-sarif.yml

@@ -1,78 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     (cd pr-checks; pip install ruamel.yaml@0.17.31 && python3 sync.py)
-# to regenerate this file.
-
-name: 'PR Check - Upload-sarif: code quality endpoint'
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request:
-    types:
-      - opened
-      - synchronize
-      - reopened
-      - ready_for_review
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch: {}
-jobs:
-  upload-quality-sarif:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: ubuntu-latest
-            version: default
-          - os: macos-latest
-            version: default
-          - os: windows-latest
-            version: default
-    name: 'Upload-sarif: code quality endpoint'
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@v4
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - name: Install Go
-        uses: actions/setup-go@v5
-        with:
-          go-version: '>=1.21.0'
-          cache: false
-      - uses: ./../action/init
-        with:
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-          languages: cpp,csharp,java,javascript,python
-          config-file: ${{ github.repository }}/tests/multi-language-repo/.github/codeql/custom-queries.yml@${{
-            github.sha }}
-          quality-queries: code-quality
-      - name: Build code
-        shell: bash
-        run: ./build.sh
-  # Generate some SARIF we can upload with the upload-sarif step
-      - uses: ./../action/analyze
-        with:
-          ref: refs/heads/main
-          sha: 5e235361806c361d4d3f8859e3c897658025a9a2
-          upload: never
-      - uses: ./../action/upload-sarif
-        with:
-          ref: refs/heads/main
-          sha: 5e235361806c361d4d3f8859e3c897658025a9a2
-    env:
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__upload-ref-sha-input.yml

@@ -7,71 +7,87 @@ name: "PR Check - Upload-sarif: 'ref' and 'sha' from inputs"
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
+  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-      - main
-      - releases/v*
+    - main
+    - releases/v*
   pull_request:
     types:
-      - opened
-      - synchronize
-      - reopened
-      - ready_for_review
-  schedule:
-    - cron: '0 5 * * *'
+    - opened
+    - synchronize
+    - reopened
+    - ready_for_review
   workflow_dispatch: {}
 jobs:
   upload-ref-sha-input:
     strategy:
-      fail-fast: false
       matrix:
         include:
-          - os: ubuntu-latest
-            version: default
-          - os: macos-latest
-            version: default
-          - os: windows-latest
-            version: default
+        - os: ubuntu-latest
+          version: default
+        - os: macos-latest
+          version: default
+        - os: windows-latest
+          version: default
     name: "Upload-sarif: 'ref' and 'sha' from inputs"
     permissions:
       contents: read
-      security-events: read
+      security-events: write
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-      - name: Check out repository
-        uses: actions/checkout@v4
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - name: Install Go
-        uses: actions/setup-go@v5
-        with:
-          go-version: '>=1.21.0'
-          cache: false
-      - uses: ./../action/init
-        with:
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-          languages: cpp,csharp,java,javascript,python
-          config-file: ${{ github.repository }}/tests/multi-language-repo/.github/codeql/custom-queries.yml@${{
-            github.sha }}
-      - name: Build code
-        shell: bash
-        run: ./build.sh
-  # Generate some SARIF we can upload with the upload-sarif step
-      - uses: ./../action/analyze
-        with:
-          ref: refs/heads/main
-          sha: 5e235361806c361d4d3f8859e3c897658025a9a2
-          upload: never
-      - uses: ./../action/upload-sarif
-        with:
-          ref: refs/heads/main
-          sha: 5e235361806c361d4d3f8859e3c897658025a9a2
+    - name: Setup Python on MacOS
+      uses: actions/setup-python@v4
+      if: >-
+        matrix.os == 'macos-latest' && (
+
+        matrix.version == 'stable-20220908' ||
+
+        matrix.version == 'stable-20221211' ||
+
+        matrix.version == 'stable-20230418' ||
+
+        matrix.version == 'stable-v2.13.5' ||
+
+        matrix.version == 'stable-v2.14.6')
+      with:
+        python-version: '3.11'
+    - name: Check out repository
+      uses: actions/checkout@v4
+    - name: Prepare test
+      id: prepare-test
+      uses: ./.github/actions/prepare-test
+      with:
+        version: ${{ matrix.version }}
+        use-all-platform-bundle: 'false'
+    - name: Set environment variable for Swift enablement
+      if: >-
+        runner.os != 'Windows' && (
+            matrix.version == '20220908' ||
+            matrix.version == '20221211'
+        )
+      shell: bash
+      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
+    - uses: ./../action/init
+      with:
+        tools: ${{ steps.prepare-test.outputs.tools-url }}
+        languages: cpp,csharp,java,javascript,python
+        config-file: ${{ github.repository }}/tests/multi-language-repo/.github/codeql/custom-queries.yml@${{
+          github.sha }}
+    - name: Build code
+      shell: bash
+      run: ./build.sh
+    - uses: ./../action/analyze
+      with:
+        upload-database: false
+        ref: refs/heads/main
+        sha: 5e235361806c361d4d3f8859e3c897658025a9a2
+        upload: never
+    - uses: ./../action/upload-sarif
+      with:
+        ref: refs/heads/main
+        sha: 5e235361806c361d4d3f8859e3c897658025a9a2
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__with-checkout-path.yml

@@ -7,113 +7,180 @@ name: PR Check - Use a custom `checkout_path`
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
+  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-      - main
-      - releases/v*
+    - main
+    - releases/v*
   pull_request:
     types:
-      - opened
-      - synchronize
-      - reopened
-      - ready_for_review
-  schedule:
-    - cron: '0 5 * * *'
+    - opened
+    - synchronize
+    - reopened
+    - ready_for_review
   workflow_dispatch: {}
 jobs:
   with-checkout-path:
     strategy:
-      fail-fast: false
       matrix:
         include:
-          - os: ubuntu-latest
-            version: linked
-          - os: macos-latest
-            version: linked
-          - os: windows-latest
-            version: linked
+        - os: ubuntu-latest
+          version: stable-20220908
+        - os: macos-latest
+          version: stable-20220908
+        - os: windows-latest
+          version: stable-20220908
+        - os: ubuntu-latest
+          version: stable-20221211
+        - os: macos-latest
+          version: stable-20221211
+        - os: windows-latest
+          version: stable-20221211
+        - os: ubuntu-latest
+          version: stable-20230418
+        - os: macos-latest
+          version: stable-20230418
+        - os: windows-latest
+          version: stable-20230418
+        - os: ubuntu-latest
+          version: stable-v2.13.5
+        - os: macos-latest
+          version: stable-v2.13.5
+        - os: windows-latest
+          version: stable-v2.13.5
+        - os: ubuntu-latest
+          version: stable-v2.14.6
+        - os: macos-latest
+          version: stable-v2.14.6
+        - os: windows-latest
+          version: stable-v2.14.6
+        - os: ubuntu-latest
+          version: default
+        - os: macos-latest
+          version: default
+        - os: windows-latest
+          version: default
+        - os: ubuntu-latest
+          version: latest
+        - os: macos-latest
+          version: latest
+        - os: windows-latest
+          version: latest
+        - os: ubuntu-latest
+          version: nightly-latest
+        - os: macos-latest
+          version: nightly-latest
+        - os: windows-latest
+          version: nightly-latest
     name: Use a custom `checkout_path`
     permissions:
       contents: read
-      security-events: read
+      security-events: write
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-      - name: Check out repository
-        uses: actions/checkout@v4
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - name: Install Go
-        uses: actions/setup-go@v5
-        with:
-          go-version: '>=1.21.0'
-          cache: false
-      - name: Delete original checkout
-        shell: bash
-        run: |
-          # delete the original checkout so we don't accidentally use it.
-          # Actions does not support deleting the current working directory, so we
-          # delete the contents of the directory instead.
-          rm -rf ./* .github .git
+    - name: Setup Python on MacOS
+      uses: actions/setup-python@v4
+      if: >-
+        matrix.os == 'macos-latest' && (
+
+        matrix.version == 'stable-20220908' ||
+
+        matrix.version == 'stable-20221211' ||
+
+        matrix.version == 'stable-20230418' ||
+
+        matrix.version == 'stable-v2.13.5' ||
+
+        matrix.version == 'stable-v2.14.6')
+      with:
+        python-version: '3.11'
+    - name: Check out repository
+      uses: actions/checkout@v4
+    - name: Prepare test
+      id: prepare-test
+      uses: ./.github/actions/prepare-test
+      with:
+        version: ${{ matrix.version }}
+        use-all-platform-bundle: 'false'
+    - name: Set environment variable for Swift enablement
+      if: >-
+        runner.os != 'Windows' && (
+            matrix.version == '20220908' ||
+            matrix.version == '20221211'
+        )
+      shell: bash
+      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
+    - name: Delete original checkout
+      shell: bash
+      run: |
+        # delete the original checkout so we don't accidentally use it.
+        # Actions does not support deleting the current working directory, so we
+        # delete the contents of the directory instead.
+        rm -rf ./* .github .git
   # Check out the actions repo again, but at a different location.
   # choose an arbitrary SHA so that we can later test that the commit_oid is not from main
-      - uses: actions/checkout@v4
-        with:
-          ref: 474bbf07f9247ffe1856c6a0f94aeeb10e7afee6
-          path: x/y/z/some-path
+    - uses: actions/checkout@v4
+      with:
+        ref: 474bbf07f9247ffe1856c6a0f94aeeb10e7afee6
+        path: x/y/z/some-path
 
-      - uses: ./../action/init
-        with:
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
+    - uses: ./../action/init
+      with:
+        tools: ${{ steps.prepare-test.outputs.tools-url }}
       # it's enough to test one compiled language and one interpreted language
-          languages: csharp,javascript
-          source-root: x/y/z/some-path/tests/multi-language-repo
+        languages: csharp,javascript
+        source-root: x/y/z/some-path/tests/multi-language-repo
+        debug: true
 
-      - name: Build code
-        shell: bash
-        working-directory: x/y/z/some-path/tests/multi-language-repo
-        run: |
-          ./build.sh
+    - name: Build code
+      shell: bash
+      working-directory: x/y/z/some-path/tests/multi-language-repo
+      run: |
+        ./build.sh
 
-      - uses: ./../action/analyze
-        with:
-          checkout_path: x/y/z/some-path/tests/multi-language-repo
-          ref: v1.1.0
-          sha: 474bbf07f9247ffe1856c6a0f94aeeb10e7afee6
+    - uses: ./../action/analyze
+      with:
+        checkout_path: x/y/z/some-path/tests/multi-language-repo
+        ref: v1.1.0
+        sha: 474bbf07f9247ffe1856c6a0f94aeeb10e7afee6
+        upload: never
+        upload-database: false
 
-      - name: Verify SARIF after upload
-        shell: bash
-        run: |
-          EXPECTED_COMMIT_OID="474bbf07f9247ffe1856c6a0f94aeeb10e7afee6"
-          EXPECTED_REF="v1.1.0"
-          EXPECTED_CHECKOUT_URI_SUFFIX="/x/y/z/some-path/tests/multi-language-repo"
+    - uses: ./../action/upload-sarif
+      with:
+        ref: v1.1.0
+        sha: 474bbf07f9247ffe1856c6a0f94aeeb10e7afee6
+        checkout_path: x/y/z/some-path/tests/multi-language-repo
 
-          ACTUAL_COMMIT_OID="$(cat "$RUNNER_TEMP/payload.json" | jq -r .commit_oid)"
-          ACTUAL_REF="$(cat "$RUNNER_TEMP/payload.json" | jq -r .ref)"
-          ACTUAL_CHECKOUT_URI="$(cat "$RUNNER_TEMP/payload.json" | jq -r .checkout_uri)"
+    - name: Verify SARIF after upload
+      shell: bash
+      run: |
+        EXPECTED_COMMIT_OID="474bbf07f9247ffe1856c6a0f94aeeb10e7afee6"
+        EXPECTED_REF="v1.1.0"
+        EXPECTED_CHECKOUT_URI_SUFFIX="/x/y/z/some-path/tests/multi-language-repo"
 
-          if [[ "$EXPECTED_COMMIT_OID" != "$ACTUAL_COMMIT_OID" ]]; then
-            echo "::error Invalid commit oid. Expected: $EXPECTED_COMMIT_OID Actual: $ACTUAL_COMMIT_OID"
-            echo "$RUNNER_TEMP/payload.json"
-            exit 1
-          fi
+        ACTUAL_COMMIT_OID="$(cat "$RUNNER_TEMP/payload.json" | jq -r .commit_oid)"
+        ACTUAL_REF="$(cat "$RUNNER_TEMP/payload.json" | jq -r .ref)"
+        ACTUAL_CHECKOUT_URI="$(cat "$RUNNER_TEMP/payload.json" | jq -r .checkout_uri)"
 
-          if [[ "$EXPECTED_REF" != "$ACTUAL_REF" ]]; then
-            echo "::error Invalid ref. Expected: '$EXPECTED_REF' Actual: '$ACTUAL_REF'"
-            echo "$RUNNER_TEMP/payload.json"
-            exit 1
-          fi
+        if [[ "$EXPECTED_COMMIT_OID" != "$ACTUAL_COMMIT_OID" ]]; then
+          echo "::error Invalid commit oid. Expected: $EXPECTED_COMMIT_OID Actual: $ACTUAL_COMMIT_OID"
+          echo "$RUNNER_TEMP/payload.json"
+          exit 1
+        fi
 
-          if [[ "$ACTUAL_CHECKOUT_URI" != *$EXPECTED_CHECKOUT_URI_SUFFIX ]]; then
-            echo "::error Invalid checkout URI suffix. Expected suffix: $EXPECTED_CHECKOUT_URI_SUFFIX Actual uri: $ACTUAL_CHECKOUT_URI"
-            echo "$RUNNER_TEMP/payload.json"
-            exit 1
-          fi
+        if [[ "$EXPECTED_REF" != "$ACTUAL_REF" ]]; then
+          echo "::error Invalid ref. Expected: '$EXPECTED_REF' Actual: '$ACTUAL_REF'"
+          echo "$RUNNER_TEMP/payload.json"
+          exit 1
+        fi
+
+        if [[ "$ACTUAL_CHECKOUT_URI" != *$EXPECTED_CHECKOUT_URI_SUFFIX ]]; then
+          echo "::error Invalid checkout URI suffix. Expected suffix: $EXPECTED_CHECKOUT_URI_SUFFIX Actual uri: $ACTUAL_CHECKOUT_URI"
+          echo "$RUNNER_TEMP/payload.json"
+          exit 1
+        fi
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__zstd-bundle-streaming.yml

@@ -1,110 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     (cd pr-checks; pip install ruamel.yaml@0.17.31 && python3 sync.py)
-# to regenerate this file.
-
-name: PR Check - Zstandard bundle (streaming)
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request:
-    types:
-      - opened
-      - synchronize
-      - reopened
-      - ready_for_review
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch: {}
-jobs:
-  zstd-bundle-streaming:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: macos-latest
-            version: linked
-          - os: ubuntu-latest
-            version: linked
-    name: Zstandard bundle (streaming)
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@v4
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - name: Remove CodeQL from toolcache
-        uses: actions/github-script@v7
-        with:
-          script: |
-            const fs = require('fs');
-            const path = require('path');
-            const codeqlPath = path.join(process.env['RUNNER_TOOL_CACHE'], 'CodeQL');
-            if (codeqlPath !== undefined) {
-              fs.rmdirSync(codeqlPath, { recursive: true });
-            }
-      - id: init
-        uses: ./../action/init
-        with:
-          languages: javascript
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-      - uses: ./../action/analyze
-        with:
-          output: ${{ runner.temp }}/results
-          upload-database: false
-      - name: Upload SARIF
-        uses: actions/upload-artifact@v4
-        with:
-          name: ${{ matrix.os }}-zstd-bundle.sarif
-          path: ${{ runner.temp }}/results/javascript.sarif
-          retention-days: 7
-      - name: Check diagnostic with expected tools URL appears in SARIF
-        uses: actions/github-script@v7
-        env:
-          SARIF_PATH: ${{ runner.temp }}/results/javascript.sarif
-        with:
-          script: |
-            const fs = require('fs');
-
-            const sarif = JSON.parse(fs.readFileSync(process.env['SARIF_PATH'], 'utf8'));
-            const run = sarif.runs[0];
-
-            const toolExecutionNotifications = run.invocations[0].toolExecutionNotifications;
-            const downloadTelemetryNotifications = toolExecutionNotifications.filter(n =>
-              n.descriptor.id === 'codeql-action/bundle-download-telemetry'
-            );
-            if (downloadTelemetryNotifications.length !== 1) {
-              core.setFailed(
-                'Expected exactly one reporting descriptor in the ' +
-                  `'runs[].invocations[].toolExecutionNotifications[]' SARIF property, but found ` +
-                  `${downloadTelemetryNotifications.length}. All notification reporting descriptors: ` +
-                  `${JSON.stringify(toolExecutionNotifications)}.`
-              );
-            }
-
-            const toolsUrl = downloadTelemetryNotifications[0].properties.attributes.toolsUrl;
-            console.log(`Found tools URL: ${toolsUrl}`);
-
-            if (!toolsUrl.endsWith('.tar.zst')) {
-              core.setFailed(
-                `Expected the tools URL to be a .tar.zst file, but found ${toolsUrl}.`
-              );
-            }
-    env:
-      CODEQL_ACTION_ZSTD_BUNDLE: true
-      CODEQL_ACTION_ZSTD_BUNDLE_STREAMING_EXTRACTION: true
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__zstd-bundle.yml

@@ -1,113 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     (cd pr-checks; pip install ruamel.yaml@0.17.31 && python3 sync.py)
-# to regenerate this file.
-
-name: PR Check - Zstandard bundle
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request:
-    types:
-      - opened
-      - synchronize
-      - reopened
-      - ready_for_review
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch: {}
-jobs:
-  zstd-bundle:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: macos-latest
-            version: linked
-          - os: ubuntu-latest
-            version: linked
-          - os: windows-latest
-            version: linked
-    name: Zstandard bundle
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@v4
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - name: Remove CodeQL from toolcache
-        uses: actions/github-script@v7
-        with:
-          script: |
-            const fs = require('fs');
-            const path = require('path');
-            const codeqlPath = path.join(process.env['RUNNER_TOOL_CACHE'], 'CodeQL');
-            if (codeqlPath !== undefined) {
-              fs.rmdirSync(codeqlPath, { recursive: true });
-            }
-      - id: init
-        uses: ./../action/init
-        with:
-          languages: javascript
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-      - uses: ./../action/analyze
-        with:
-          output: ${{ runner.temp }}/results
-          upload-database: false
-      - name: Upload SARIF
-        uses: actions/upload-artifact@v4
-        with:
-          name: ${{ matrix.os }}-zstd-bundle.sarif
-          path: ${{ runner.temp }}/results/javascript.sarif
-          retention-days: 7
-      - name: Check diagnostic with expected tools URL appears in SARIF
-        uses: actions/github-script@v7
-        env:
-          SARIF_PATH: ${{ runner.temp }}/results/javascript.sarif
-        with:
-          script: |
-            const fs = require('fs');
-
-            const sarif = JSON.parse(fs.readFileSync(process.env['SARIF_PATH'], 'utf8'));
-            const run = sarif.runs[0];
-
-            const toolExecutionNotifications = run.invocations[0].toolExecutionNotifications;
-            const downloadTelemetryNotifications = toolExecutionNotifications.filter(n =>
-              n.descriptor.id === 'codeql-action/bundle-download-telemetry'
-            );
-            if (downloadTelemetryNotifications.length !== 1) {
-              core.setFailed(
-                'Expected exactly one reporting descriptor in the ' +
-                  `'runs[].invocations[].toolExecutionNotifications[]' SARIF property, but found ` +
-                  `${downloadTelemetryNotifications.length}. All notification reporting descriptors: ` +
-                  `${JSON.stringify(toolExecutionNotifications)}.`
-              );
-            }
-
-            const toolsUrl = downloadTelemetryNotifications[0].properties.attributes.toolsUrl;
-            console.log(`Found tools URL: ${toolsUrl}`);
-
-            const expectedExtension = process.env['RUNNER_OS'] === 'Windows' ? '.tar.gz' : '.tar.zst';
-
-            if (!toolsUrl.endsWith(expectedExtension)) {
-              core.setFailed(
-                `Expected the tools URL to be a ${expectedExtension} file, but found ${toolsUrl}.`
-              );
-            }
-    env:
-      CODEQL_ACTION_ZSTD_BUNDLE: true
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/check-expected-release-files.yml

@@ -13,9 +13,6 @@ jobs:
   check-expected-release-files:
     runs-on: ubuntu-latest
 
-    permissions:
-      contents: read
-
     steps:
       - name: Checkout CodeQL Action
         uses: actions/checkout@v4

.github/workflows/codeql.yml

@@ -24,7 +24,7 @@ jobs:
       versions: ${{ steps.compare.outputs.versions }}
 
     permissions:
-      contents: read
+      security-events: write
 
     steps:
     - uses: actions/checkout@v4
@@ -41,7 +41,7 @@ jobs:
       id: init-latest
       uses: ./init
       with:
-        tools: linked
+        tools: latest
         languages: javascript
     - name: Compare default and latest CodeQL bundle versions
       id: compare
@@ -54,33 +54,31 @@ jobs:
         echo "Default CodeQL bundle version is $CODEQL_VERSION_DEFAULT"
         echo "Latest CodeQL bundle version is $CODEQL_VERSION_LATEST"
 
-        # If we're running on a pull request, run with both bundles, even if `tools: linked` would
+        # If we're running on a pull request, run with both bundles, even if `tools: latest` would
         # be the same as `tools: null`. This allows us to make the job for each of the bundles a
         # required status check.
         #
-        # If we're running on push or schedule, then we can skip running with `tools: linked` when it would be
+        # If we're running on push or schedule, then we can skip running with `tools: latest` when it would be
         # the same as running with `tools: null`.
         if [[ "$GITHUB_EVENT_NAME" != "pull_request" && "$CODEQL_VERSION_DEFAULT" == "$CODEQL_VERSION_LATEST" ]]; then
           VERSIONS_JSON='[null]'
         else
-          VERSIONS_JSON='[null, "linked"]'
+          VERSIONS_JSON='[null, "latest"]'
         fi
 
         # Output a JSON-encoded list with the distinct versions to test against.
         echo "Suggested matrix config for analysis job: $VERSIONS_JSON"
         echo "versions=${VERSIONS_JSON}" >> $GITHUB_OUTPUT
 
-  analyze-javascript:
+  build:
     needs: [check-codeql-versions]
     strategy:
-      fail-fast: false
       matrix:
-        os: [ubuntu-22.04,ubuntu-24.04,windows-2022,windows-2025,macos-13,macos-14,macos-15]
+        os: [ubuntu-20.04,ubuntu-22.04,windows-2019,windows-2022,macos-11,macos-12,macos-13]
         tools: ${{ fromJson(needs.check-codeql-versions.outputs.versions) }}
     runs-on: ${{ matrix.os }}
 
     permissions:
-      contents: read
       security-events: write
 
     steps:
@@ -98,29 +96,3 @@ jobs:
       run: ${{steps.init.outputs.codeql-path}} version --format=json
     - name: Perform CodeQL Analysis
       uses: ./analyze
-      with:
-        category: "/language:javascript"
-
-
-  analyze-actions:
-    runs-on: ubuntu-latest
-
-    strategy:
-      fail-fast: false
-
-    permissions:
-      contents: read
-      security-events: write
-
-    steps:
-    - name: Checkout
-      uses: actions/checkout@v4
-    - name: Initialize CodeQL
-      uses: ./init
-      with:
-        languages: actions
-        config-file: ./.github/codeql/codeql-actions-config.yml
-    - name: Perform CodeQL Analysis
-      uses: ./analyze
-      with:
-        category: "/language:actions"

.github/workflows/codescanning-config-cli.yml

@@ -3,9 +3,7 @@
 name: Code-Scanning config CLI tests
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  # Diff informed queries add an additional query filter which is not yet
-  # taken into account by these tests.
-  CODEQL_ACTION_DIFF_INFORMED_QUERIES: false
+  CODEQL_PASS_CONFIG_TO_CLI: true
 
 on:
   push:
@@ -18,27 +16,19 @@ on:
     - synchronize
     - reopened
     - ready_for_review
-  schedule:
-    - cron: '0 5 * * *'
   workflow_dispatch: {}
 
 jobs:
   code-scanning-config-tests:
     continue-on-error: true
 
-    permissions:
-      contents: read
-      packages: read
-      security-events: read
-
     strategy:
-      fail-fast: false
       matrix:
         include:
         - os: ubuntu-latest
-          version: linked
+          version: latest
         - os: macos-latest
-          version: linked
+          version: latest
         - os: ubuntu-latest
           version: default
         - os: macos-latest
@@ -214,3 +204,15 @@ jobs:
         packs: + codeql/javascript-queries
         config-file-test: .github/codeql/other-config-properties.yml
         tools: ${{ steps.prepare-test.outputs.tools-url }}
+
+    - name: Config not generated when env var is not set
+      if: success() || failure()
+      env:
+        CODEQL_PASS_CONFIG_TO_CLI: false
+      uses: ./../action/.github/actions/check-codescanning-config
+      with:
+        expected-config-file-contents: ""
+        languages: javascript
+        packs: + codeql/javascript-queries
+        config-file-test: .github/codeql/other-config-properties.yml
+        tools: ${{ steps.prepare-test.outputs.tools-url }}

.github/workflows/debug-artifacts-failure-safe.yml

@@ -1,102 +0,0 @@
-# Checks logs, SARIF, and database bundle debug artifacts exist
-# when the analyze step fails.
-name: PR Check - Debug artifacts after failure
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-on:
-  push:
-    branches:
-    - main
-    - releases/v*
-  pull_request:
-    types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch: {}
-jobs:
-  upload-artifacts:
-    strategy:
-      fail-fast: false
-      matrix:
-        version:
-        - stable-v2.20.3
-        - default
-        - linked
-        - nightly-latest
-    name: Upload debug artifacts after failure in analyze
-    continue-on-error: true
-    env:
-      CODEQL_ACTION_TEST_MODE: true
-    permissions:
-      contents: read
-    timeout-minutes: 45
-    runs-on: ubuntu-latest
-    steps:
-      - name: Dump GitHub event
-        run: cat "${GITHUB_EVENT_PATH}"
-      - name: Check out repository
-        uses: actions/checkout@v4
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-      - uses: actions/setup-go@v5
-        with:
-          go-version: ^1.13.1
-      - uses: ./../action/init
-        with:
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-          debug: true
-          debug-artifact-name: my-debug-artifacts
-          debug-database-name: my-db
-      - name: Build code
-        shell: bash
-        run: ./build.sh
-      - uses: ./../action/analyze
-        id: analysis
-        env:
-          # Forces a failure in this step.
-          CODEQL_ACTION_EXTRA_OPTIONS: '{ "database": { "finalize": ["--invalid-option"] } }'
-        with:
-          expect-error: true
-  download-and-check-artifacts:
-    name: Download and check debug artifacts after failure in analyze
-    needs: upload-artifacts
-    timeout-minutes: 45
-    permissions:
-      contents: read
-    runs-on: ubuntu-latest
-    steps:
-      - name: Download all artifacts
-        uses: actions/download-artifact@v4
-      - name: Check expected artifacts exist
-        shell: bash
-        run: |
-          LANGUAGES="cpp csharp go java javascript python"
-          for version in $VERSIONS; do
-            echo "Artifacts from version $version:"
-            pushd "./my-debug-artifacts-${version//./}"
-            for language in $LANGUAGES; do
-              echo "- Checking $language"
-              if [[ ! -f "my-db-$language-partial.zip" ]] ; then
-                echo "Missing a partial database bundle for $language"
-                exit 1
-              fi
-              if [[ ! -d "log" ]] ; then
-                echo "Missing database initialization logs"
-                exit 1
-              fi
-              if [[ ! "$language" == "go" ]] && [[ ! -d "$language/log" ]] ; then
-                echo "Missing logs for $language"
-                exit 1
-              fi
-            done
-            popd
-          done
-        env:
-          GO111MODULE: auto

.github/workflows/debug-artifacts-failure.yml

@@ -0,0 +1,104 @@
+# Checks logs, SARIF, and database bundle debug artifacts exist
+# when the analyze step fails.
+name: PR Check - Debug artifacts after failure
+env:
+  # Disable Kotlin analysis while it's incompatible with Kotlin 1.8, until we find a
+  # workaround for our PR checks.
+  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: true
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+on:
+  push:
+    branches:
+    - main
+    - releases/v*
+  pull_request:
+    types:
+    - opened
+    - synchronize
+    - reopened
+    - ready_for_review
+  workflow_dispatch: {}
+jobs:
+  upload-artifacts:
+    strategy:
+      matrix:
+        os: [ubuntu-latest, macos-latest]
+    name: Upload debug artifacts after failure in analyze
+    continue-on-error: true
+    env:
+      CODEQL_ACTION_TEST_MODE: true
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Dump GitHub event
+        run: cat "${GITHUB_EVENT_PATH}"
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: latest
+      - uses: actions/setup-go@v4
+        with:
+          go-version: ^1.13.1
+      - name: Setup Python on MacOS
+        uses: actions/setup-python@v4
+        if: |
+          matrix.os == 'macos-latest' && (
+          matrix.version == 'stable-20220908' ||
+          matrix.version == 'stable-20221211' ||
+          matrix.version == 'stable-20230418' ||
+          matrix.version == 'stable-v2.13.5' ||
+          matrix.version == 'stable-v2.14.6')
+        with:
+          python-version: '3.11'
+      - uses: ./../action/init
+        with:
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+          debug: true
+          debug-artifact-name: my-debug-artifacts
+          debug-database-name: my-db
+      - name: Build code
+        shell: bash
+        run: ./build.sh
+      - uses: ./../action/analyze
+        id: analysis
+        with:
+          expect-error: true
+          ram: 1
+  download-and-check-artifacts:
+    name: Download and check debug artifacts after failure in analyze
+    needs: upload-artifacts
+    timeout-minutes: 45
+    runs-on: ubuntu-latest
+    steps:
+      - name: Download all artifacts
+        uses: actions/download-artifact@v3
+      - name: Check expected artifacts exist
+        shell: bash
+        run: |
+          OPERATING_SYSTEMS="ubuntu-latest macos-latest"
+          LANGUAGES="cpp csharp go java javascript python"
+          for os in $OPERATING_SYSTEMS; do
+            pushd "./my-debug-artifacts-$os"
+            echo "Artifacts from run on $os:"
+            for language in $LANGUAGES; do
+              echo "- Checking $language"
+              if [[ ! -f "my-db-$language-partial.zip" ]] ; then
+                echo "Missing a partial database bundle for $language"
+                exit 1
+              fi
+              if [[ ! -d "log" ]] ; then
+                echo "Missing database initialization logs"
+                exit 1
+              fi
+              if [[ ! "$language" == "go" ]] && [[ ! -d "$language/log" ]] ; then
+                echo "Missing logs for $language"
+                exit 1
+              fi
+            done
+            popd
+          done
+        env:
+          GO111MODULE: auto

.github/workflows/debug-artifacts-safe.yml

@@ -1,97 +0,0 @@
-# Checks logs, SARIF, and database bundle debug artifacts exist.
-name: PR Check - Debug artifact upload
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-on:
-  push:
-    branches:
-    - main
-    - releases/v*
-  pull_request:
-    types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch: {}
-jobs:
-  upload-artifacts:
-    strategy:
-      fail-fast: false
-      matrix:
-        version:
-        - stable-v2.20.3
-        - default
-        - linked
-        - nightly-latest
-    name: Upload debug artifacts
-    env:
-      CODEQL_ACTION_TEST_MODE: true
-    timeout-minutes: 45
-    permissions:
-      contents: read
-    runs-on: ubuntu-latest
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@v4
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-      - uses: actions/setup-go@v5
-        with:
-          go-version: ^1.13.1
-      - uses: ./../action/init
-        id: init
-        with:
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-          debug: true
-          debug-artifact-name: my-debug-artifacts
-          debug-database-name: my-db
-          # We manually exclude Swift from the languages list here, as it is not supported on Ubuntu
-          languages: cpp,csharp,go,java,javascript,python,ruby
-      - name: Build code
-        shell: bash
-        run: ./build.sh
-      - uses: ./../action/analyze
-        id: analysis
-  download-and-check-artifacts:
-    name: Download and check debug artifacts
-    needs: upload-artifacts
-    timeout-minutes: 45
-    permissions:
-      contents: read
-    runs-on: ubuntu-latest
-    steps:
-      - name: Download all artifacts
-        uses: actions/download-artifact@v4
-      - name: Check expected artifacts exist
-        shell: bash
-        run: |
-          VERSIONS="stable-v2.20.3 default linked nightly-latest"
-          LANGUAGES="cpp csharp go java javascript python"
-          for version in $VERSIONS; do
-            pushd "./my-debug-artifacts-${version//./}"
-            echo "Artifacts from version $version:"
-            for language in $LANGUAGES; do
-              echo "- Checking $language"
-              if [[ ! -f "$language.sarif" ]] ; then
-                echo "Missing a SARIF file for $language"
-                exit 1
-              fi
-              if [[ ! -f "my-db-$language.zip" ]] ; then
-                echo "Missing a database bundle for $language"
-                exit 1
-              fi
-              if [[ ! -d "$language/log" ]] ; then
-                echo "Missing logs for $language"
-                exit 1
-              fi
-            done
-            popd
-          done
-        env:
-          GO111MODULE: auto

.github/workflows/debug-artifacts.yml

@@ -0,0 +1,114 @@
+# Checks logs, SARIF, and database bundle debug artifacts exist.
+name: PR Check - Debug artifact upload
+env:
+  # Disable Kotlin analysis while it's incompatible with Kotlin 1.8, until we find a
+  # workaround for our PR checks.
+  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: true
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+on:
+  push:
+    branches:
+    - main
+    - releases/v*
+  pull_request:
+    types:
+    - opened
+    - synchronize
+    - reopened
+    - ready_for_review
+  workflow_dispatch: {}
+jobs:
+  upload-artifacts:
+    strategy:
+      matrix:
+        os:
+        - ubuntu-latest
+        - macos-latest
+        version:
+        - stable-20220908
+        - stable-20221211
+        - stable-20230418
+        - stable-v2.13.5
+        - stable-v2.14.6
+        - default
+        - latest
+        - nightly-latest
+    name: Upload debug artifacts
+    env:
+      CODEQL_ACTION_TEST_MODE: true
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+      - uses: actions/setup-go@v4
+        with:
+          go-version: ^1.13.1
+      - name: Setup Python on MacOS
+        uses: actions/setup-python@v4
+        if: |
+          matrix.os == 'macos-latest' && (
+          matrix.version == 'stable-20220908' ||
+          matrix.version == 'stable-20221211' ||
+          matrix.version == 'stable-20230418' ||
+          matrix.version == 'stable-v2.13.5' ||
+          matrix.version == 'stable-v2.14.6')
+        with:
+          python-version: '3.11'
+      - uses: ./../action/init
+        id: init
+        with:
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+          debug: true
+          debug-artifact-name: my-debug-artifacts
+          debug-database-name: my-db
+      - uses: ./../action/.github/actions/setup-swift
+        with:
+          codeql-path: ${{ steps.init.outputs.codeql-path }}
+      - name: Build code
+        shell: bash
+        run: ./build.sh
+      - uses: ./../action/analyze
+        id: analysis
+  download-and-check-artifacts:
+    name: Download and check debug artifacts
+    needs: upload-artifacts
+    timeout-minutes: 45
+    runs-on: ubuntu-latest
+    steps:
+      - name: Download all artifacts
+        uses: actions/download-artifact@v3
+      - name: Check expected artifacts exist
+        shell: bash
+        run: |
+          VERSIONS="stable-20220908 stable-20221211 stable-20230418 stable-v2.13.5 stable-v2.14.6 default latest nightly-latest"
+          LANGUAGES="cpp csharp go java javascript python"
+          for version in $VERSIONS; do
+            for os in ubuntu-latest macos-latest; do
+              pushd "./my-debug-artifacts-$os-${version//./}"
+              echo "Artifacts from version $version on $os:"
+              for language in $LANGUAGES; do
+                echo "- Checking $language"
+                if [[ ! -f "$language.sarif" ]] ; then
+                  echo "Missing a SARIF file for $language"
+                  exit 1
+                fi
+                if [[ ! -f "my-db-$language.zip" ]] ; then
+                  echo "Missing a database bundle for $language"
+                  exit 1
+                fi
+                if [[ ! -d "$language/log" ]] ; then
+                  echo "Missing logs for $language"
+                  exit 1
+                fi
+              done
+              popd
+            done
+          done
+        env:
+          GO111MODULE: auto

.github/workflows/expected-queries-runs.yml

@@ -11,8 +11,6 @@ on:
     - synchronize
     - reopened
     - ready_for_review
-  schedule:
-    - cron: '0 5 * * *'
   workflow_dispatch: {}
 
 jobs:
@@ -22,9 +20,6 @@ jobs:
       CODEQL_ACTION_TEST_MODE: true
     timeout-minutes: 45
     runs-on: ubuntu-latest
-    permissions:
-      contents: read
-      security-events: read
     steps:
     - name: Check out repository
       uses: actions/checkout@v4
@@ -32,7 +27,7 @@ jobs:
       id: prepare-test
       uses: ./.github/actions/prepare-test
       with:
-        version: linked
+        version: latest
     - uses: ./../action/init
       with:
         languages: javascript
@@ -40,6 +35,8 @@ jobs:
     - uses: ./../action/analyze
       with:
         output: ${{ runner.temp }}/results
+        upload-database: false
+        upload: never
 
     - name: Check Sarif
       uses: ./../action/.github/actions/check-sarif

.github/workflows/post-release-mergeback.yml

@@ -21,16 +21,11 @@ on:
 jobs:
   merge-back:
     runs-on: ubuntu-latest
-    environment: Automation
     if: github.repository == 'github/codeql-action'
     env:
       BASE_BRANCH: "${{ github.event.inputs.baseBranch || 'main' }}"
       HEAD_BRANCH: "${{ github.head_ref || github.ref }}"
 
-    permissions:
-      contents: write # needed to create tags and push commits
-      pull-requests: write
-
     steps:
       - name: Dump environment
         run: env
@@ -113,17 +108,6 @@ jobs:
           # - `--force` since we're overwriting the `vN` tag
           git push origin --atomic --force refs/tags/"${VERSION}" refs/tags/"${major_version_tag}"
 
-      - name: Prepare partial Changelog
-        env:
-          PARTIAL_CHANGELOG: "${{ runner.temp }}/partial_changelog.md"
-          VERSION: "${{ steps.getVersion.outputs.version }}"
-        run: |
-          python .github/workflows/script/prepare_changelog.py CHANGELOG.md "$VERSION" > $PARTIAL_CHANGELOG
-
-          echo "::group::Partial CHANGELOG"
-          cat $PARTIAL_CHANGELOG
-          echo "::endgroup::"
-
       - name: Create mergeback branch
         if: ${{ steps.check.outputs.exists != 'true' && endsWith(github.ref_name, steps.getVersion.outputs.latest_release_branch) }}
         env:
@@ -149,8 +133,8 @@ jobs:
           # Update the version number ready for the next release
           npm version patch --no-git-tag-version
 
-          # Update the changelog, adding a new version heading directly above the most recent existing one
-          awk '!f && /##/{print "'"## [UNRELEASED]\n\nNo user facing changes.\n"'"; f=1}1' CHANGELOG.md > temp && mv temp CHANGELOG.md
+          # Update the changelog
+          perl -i -pe 's/^/## \[UNRELEASED\]\n\nNo user facing changes.\n\n/ if($.==5)' CHANGELOG.md
           git add .
           git commit -m "Update changelog and version after ${VERSION}"
 
@@ -166,23 +150,3 @@ jobs:
             --body "${pr_body}" \
             --assignee "${GITHUB_ACTOR}" \
             --draft
-
-      - name: Generate token
-        uses: actions/create-github-app-token@v2.0.6
-        id: app-token
-        with:
-          app-id: ${{ vars.AUTOMATION_APP_ID }}
-          private-key: ${{ secrets.AUTOMATION_PRIVATE_KEY }}
-
-      - name: Create the GitHub release
-        env:
-          PARTIAL_CHANGELOG: "${{ runner.temp }}/partial_changelog.md"
-          VERSION: "${{ steps.getVersion.outputs.version }}"
-          GH_TOKEN: ${{ steps.app-token.outputs.token }}
-        run: |
-          # Do not mark this release as latest. The most recent CLI release must be marked as latest.
-          gh release create \
-            "$VERSION" \
-            --latest=false \
-            --title "$VERSION" \
-            --notes-file "$PARTIAL_CHANGELOG"

.github/workflows/pr-checks.yml

@@ -2,6 +2,7 @@ name: PR Checks
 
 on:
   push:
+    branches: [main, releases/v*]
   pull_request:
     # Run checks on reopened draft PRs to support triggering PR checks on draft PRs that were opened
     # by other workflows.
@@ -13,35 +14,45 @@ jobs:
     name: Check JS
     runs-on: ubuntu-latest
     timeout-minutes: 45
-    permissions:
-      contents: read
-      security-events: write # needed to upload ESLint results
 
     strategy:
-      fail-fast: false
+      matrix:
+        node-types-version: [16.11, current] # run tests on 16.11 while codeql-action v2 is still supported
 
     steps:
       - name: Checkout
         uses: actions/checkout@v4
 
       - name: Lint
-        id: lint
-        run: npm run-script lint-ci
+        run: npm run-script lint
 
-      - name: Upload sarif
-        uses: github/codeql-action/upload-sarif@v3
-        with:
-          sarif_file: eslint.sarif
-          category: eslint
+      - name: Update version of @types/node
+        if: matrix.node-types-version != 'current'
+        env:
+          NODE_TYPES_VERSION: ${{ matrix.node-types-version }}
+        run: |
+          # Export `NODE_TYPES_VERSION` so it's available to jq
+          export NODE_TYPES_VERSION="${NODE_TYPES_VERSION}"
+          contents=$(jq '.devDependencies."@types/node" = env.NODE_TYPES_VERSION' package.json)
+          echo "${contents}" > package.json
+          # Usually we run `npm install` on macOS to ensure that we pick up macOS-only dependencies.
+          # However we're not checking in the updated lockfile here, so it's fine to run
+          # `npm install` on Linux.
+          npm install
+
+          if [ ! -z "$(git status --porcelain)" ]; then
+            git config --global user.email "github-actions@github.com"
+            git config --global user.name "github-actions[bot]"
+            # The period in `git add --all .` ensures that we stage deleted files too.
+            git add --all .
+            git commit -m "Use @types/node=${NODE_TYPES_VERSION}"
+          fi
 
       - name: Check generated JS
         run: .github/workflows/script/check-js.sh
 
   check-node-modules:
-    if: github.event_name != 'push' || github.ref == 'refs/heads/main' || startsWith(github.ref, 'refs/heads/releases/v')
     name: Check modules up to date
-    permissions:
-      contents: read
     runs-on: macos-latest
     timeout-minutes: 45
 
@@ -51,10 +62,7 @@ jobs:
         run: .github/workflows/script/check-node-modules.sh
 
   check-file-contents:
-    if: github.event_name != 'push' || github.ref == 'refs/heads/main' || startsWith(github.ref, 'refs/heads/releases/v')
     name: Check file contents
-    permissions:
-      contents: read
     runs-on: ubuntu-latest
     timeout-minutes: 45
 
@@ -63,7 +71,7 @@ jobs:
         uses: actions/checkout@v4
 
       - name: Set up Python
-        uses: actions/setup-python@v5
+        uses: actions/setup-python@v4
         with:
           python-version: 3.11
 
@@ -78,19 +86,27 @@ jobs:
         run: .github/workflows/script/verify-pr-checks.sh
 
   npm-test:
-    if: github.event_name != 'push' || github.ref == 'refs/heads/main' || startsWith(github.ref, 'refs/heads/releases/v')
     name: Unit Test
     needs: [check-js, check-node-modules]
     strategy:
-      fail-fast: false
       matrix:
         os: [ubuntu-latest, macos-latest, windows-latest]
-    permissions:
-      contents: read
     runs-on: ${{ matrix.os }}
     timeout-minutes: 45
 
     steps:
+      - name: Setup Python on MacOS
+        uses: actions/setup-python@v4
+        if: |
+          matrix.os == 'macos-latest' && (
+          matrix.version == 'stable-20220908' ||
+          matrix.version == 'stable-20221211' ||
+          matrix.version == 'stable-20230418' ||
+          matrix.version == 'stable-v2.13.5' ||
+          matrix.version == 'stable-v2.14.6')
+        with:
+          python-version: '3.11'
+
       - uses: actions/checkout@v4
       - name: npm test
         run: |
@@ -99,46 +115,44 @@ jobs:
           npm config set script-shell bash
           npm test
 
-  check-node-version:
-    if: github.event.pull_request
-    name: Check Action Node versions
+  check-backport-node-versions:
+    if: ${{ github.event.pull_request }}
+    name: Check node version for backports
     runs-on: ubuntu-latest
     timeout-minutes: 45
     env:
-      BASE_REF: ${{ github.base_ref }}
-
-    permissions:
-      contents: read
+      BASE_REF: ${{ github.event.pull_request.base }}
 
     steps:
       - uses: actions/checkout@v4
       - id: head-version
-        name: Verify all Actions use the same Node version
+        name: check HEAD node version
         run: |
-          NODE_VERSION=$(find . -name "action.yml" -exec yq -e '.runs.using' {} \; | grep node | sort | uniq)
+          # NB we are matching the node version string both with and without single quotes
+          NODE_VERSION=$(find . -name "*.yml" -exec grep -oh "using: 'node[0-9][0-9]\|using: node[0-9][0-9]" {} \; | sed -e "s/using: '//g" -e "s/using: //g" | sort | uniq)
           echo "NODE_VERSION: ${NODE_VERSION}"
           if [[ $(echo "$NODE_VERSION" | wc -l) -gt 1 ]]; then
-            echo "::error::More than one node version used in 'action.yml' files."
+            echo "Error: More than one node version used in actions."
             exit 1
           fi
           echo "node_version=${NODE_VERSION}" >> $GITHUB_OUTPUT
 
       - id: checkout-base
-        name: 'Backport: Check out base ref'
-        if: ${{ startsWith(github.head_ref, 'backport-') }}
+        name: check out base ref for backport check
+        if: ${{ startsWith(github.ref_name, 'backport-v') }}
         uses: actions/checkout@v4
         with:
           ref: ${{ env.BASE_REF }}
 
-      - name: 'Backport: Verify Node versions unchanged'
+      - name: compare with node version on base ref for backport check
         if: steps.checkout-base.outcome == 'success'
         env:
           HEAD_VERSION: ${{ steps.head-version.outputs.node_version }}
         run: |
-          BASE_VERSION=$(find . -name "action.yml" -exec yq -e '.runs.using' {} \; | grep node | sort | uniq)
+          BASE_VERSION=$(find . -name "*.yml" -exec grep -oh "using: 'node[0-9][0-9]\|using: node[0-9][0-9]" {} \; | sed -e "s/using: '//g" -e "s/using: //g" | sort | uniq)
           echo "HEAD_VERSION: ${HEAD_VERSION}"
           echo "BASE_VERSION: ${BASE_VERSION}"
           if [[ "$BASE_VERSION" != "$HEAD_VERSION" ]]; then
-            echo "::error::Cannot change the Node version of an Action in a backport PR."
+            echo "Error: Cannot change node version in a backport PR."
             exit 1
           fi

.github/workflows/publish-immutable-action.yml

@@ -1,35 +0,0 @@
-name: 'Publish Immutable Action Version'
-
-on:
-  release:
-    types: [published]
-
-jobs:
-  publish:
-    runs-on: ubuntu-latest
-    permissions:
-      contents: read
-      id-token: write
-      packages: write
-
-    steps:
-      - name: Check release name
-        id: check
-        env:
-          RELEASE_NAME: ${{ github.event.release.name }}
-        run: |
-          echo "Release name: ${{ github.event.release.name }}"
-          if [[ $RELEASE_NAME == v* ]]; then
-            echo "This is a CodeQL Action release. Create an Immutable Action"
-            echo "is-action-release=true" >> $GITHUB_OUTPUT
-          else
-            echo "This is a CodeQL Bundle release. Do not create an Immutable Action"
-            echo "is-action-release=false" >> $GITHUB_OUTPUT
-          fi
-      - name: Checking out
-        if: steps.check.outputs.is-action-release == 'true'
-        uses: actions/checkout@v4
-      - name: Publish
-        if: steps.check.outputs.is-action-release == 'true'
-        id: publish
-        uses: actions/publish-immutable-action@v0.0.4

.github/workflows/python-deps.yml

@@ -0,0 +1,186 @@
+name: Test Python Package Installation
+
+on:
+  push:
+    branches: [main, releases/v*]
+  pull_request:
+    # Run checks on reopened draft PRs to support triggering PR checks on draft PRs that were opened
+    # by other workflows.
+    types: [opened, synchronize, reopened, ready_for_review]
+    paths:
+      # Changes to this workflow.
+      - '.github/workflows/python-deps.yml'
+      # Changes to the Python package installation scripts and their tests.
+      - 'python-setup/**'
+      # Changes to the default CodeQL bundle version.
+      - '**/defaults.json'
+  schedule:
+    # Weekly on Monday.
+    - cron: '0 0 * * 1'
+  workflow_dispatch:
+
+jobs:
+  test-setup-python-scripts:
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    strategy:
+        fail-fast: false
+        matrix:
+          os: [ubuntu-20.04, ubuntu-22.04, macos-latest]
+          python_deps_type: [pipenv, poetry, requirements, setup_py]
+          python_version: [3]
+
+
+    env:
+      PYTHON_DEPS_TYPE: ${{ matrix.python_deps_type }}
+      PYTHON_VERSION: ${{ matrix.python_version }}
+
+    steps:
+    - name: Setup Python on MacOS
+      uses: actions/setup-python@v4
+      if: |
+        matrix.os == 'macos-latest' && (
+        matrix.version == 'stable-20220908' ||
+        matrix.version == 'stable-20221211' ||
+        matrix.version == 'stable-20230418' ||
+        matrix.version == 'stable-v2.13.5' ||
+        matrix.version == 'stable-v2.14.6')
+      with:
+        python-version: '3.11'
+
+    # Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it
+    - uses: actions/checkout@v4
+
+    - name: Initialize CodeQL
+      uses: ./init
+      id: init
+      with:
+        tools: latest
+        languages: python
+        setup-python-dependencies: false
+
+    - name: Test Auto Package Installation
+      run: |
+        set -x
+        $GITHUB_WORKSPACE/python-setup/install_tools.sh
+
+        cd $GITHUB_WORKSPACE/python-setup/tests/${PYTHON_DEPS_TYPE}/requests-${PYTHON_VERSION}
+
+        case ${{ matrix.os }} in
+            ubuntu-20.04*)     basePath="/opt";;
+            ubuntu-22.04*)     basePath="/opt";;
+            macos-latest*)    basePath="/Users/runner";;
+        esac
+        echo ${basePath}
+
+        $GITHUB_WORKSPACE/python-setup/auto_install_packages.py "$(dirname ${{steps.init.outputs.codeql-path}})"
+    - name: Setup for extractor
+      run: |
+        echo $CODEQL_PYTHON
+        # only run if $CODEQL_PYTHON is set
+        if [ ! -z $CODEQL_PYTHON ]; then
+            $GITHUB_WORKSPACE/python-setup/tests/from_python_exe.py $CODEQL_PYTHON;
+        fi
+
+    - name: Verify packages installed
+      run: |
+        $GITHUB_WORKSPACE/python-setup/tests/check_requests.sh ${PYTHON_VERSION} 2.31.0
+
+  # This one shouldn't fail, but also won't install packages
+  test-setup-python-scripts-non-standard-location:
+    runs-on: ${{ matrix.os }}
+    strategy:
+        fail-fast: false
+        matrix:
+          os: [ubuntu-20.04, ubuntu-22.04, macos-latest]
+
+    steps:
+    # Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it
+    - uses: actions/checkout@v4
+
+    - name: Initialize CodeQL
+      uses: ./init
+      id: init
+      with:
+        tools: latest
+        languages: python
+        setup-python-dependencies: false
+
+    - name: Test Auto Package Installation
+      run: |
+        set -x
+        $GITHUB_WORKSPACE/python-setup/install_tools.sh
+
+        cd $GITHUB_WORKSPACE/python-setup/tests/requirements/non-standard-location
+
+        case ${{ matrix.os }} in
+            ubuntu-20.04*)     basePath="/opt";;
+            ubuntu-22.04*)     basePath="/opt";;
+            macos-latest*)    basePath="/Users/runner";;
+        esac
+        echo ${basePath}
+
+        $GITHUB_WORKSPACE/python-setup/auto_install_packages.py "$(dirname ${{steps.init.outputs.codeql-path}})"
+
+    - name: Setup for extractor
+      run: |
+        echo $CODEQL_PYTHON
+        # only run if $CODEQL_PYTHON is set
+        if [ ! -z $CODEQL_PYTHON ]; then
+            $GITHUB_WORKSPACE/python-setup/tests/from_python_exe.py $CODEQL_PYTHON;
+        fi
+
+    - name: Verify packages installed
+      run: |
+        test -z $LGTM_INDEX_IMPORT_PATH
+
+  test-setup-python-scripts-windows:
+    runs-on: windows-latest
+    strategy:
+        fail-fast: false
+        matrix:
+          python_deps_type: [pipenv, poetry, requirements, setup_py]
+          python_version: [3]
+
+    env:
+      CODEQL_ACTION_TEST_MODE: true
+      PYTHON_DEPS_TYPE: ${{ matrix.python_deps_type }}
+      PYTHON_VERSION: ${{ matrix.python_version }}
+
+    steps:
+    # Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it
+    - uses: actions/checkout@v4
+
+    - uses: actions/setup-python@v4
+      with:
+        python-version: ${{ matrix.python_version }}
+
+    - name: Initialize CodeQL
+      id: init
+      uses: ./init
+      with:
+        tools: latest
+        languages: python
+        setup-python-dependencies: false
+
+    - name: Test Auto Package Installation
+      env:
+        CODEQL_PATH: ${{ steps.init.outputs.codeql-path }}
+      run: |
+        $cmd = $Env:GITHUB_WORKSPACE + "\\python-setup\\install_tools.ps1"
+        powershell -File $cmd
+
+        cd $Env:GITHUB_WORKSPACE\\python-setup/tests/$Env:PYTHON_DEPS_TYPE/requests-$Env:PYTHON_VERSION
+        $codeql_dist = (get-item $Env:CODEQL_PATH).Directory.FullName
+        py -3 $Env:GITHUB_WORKSPACE\\python-setup\\auto_install_packages.py $codeql_dist
+
+    - name: Setup for extractor
+      run: |
+        echo $Env:CODEQL_PYTHON
+
+        py -3 $Env:GITHUB_WORKSPACE\\python-setup\\tests\\from_python_exe.py $Env:CODEQL_PYTHON
+
+    - name: Verify packages installed
+      run: |
+        $cmd = $Env:GITHUB_WORKSPACE + "\\python-setup\\tests\\check_requests.ps1"
+        powershell -File $cmd $Env:PYTHON_VERSION 2.31.0

.github/workflows/python312-windows.yml

@@ -14,15 +14,11 @@ on:
 
 jobs:
   test-setup-python-scripts:
-    env:
-      CODEQL_ACTION_TEST_MODE: true
     timeout-minutes: 45
-    permissions:
-      contents: read
     runs-on: windows-latest
 
     steps:
-    - uses: actions/setup-python@v5
+    - uses: actions/setup-python@v4
       with:
         python-version: 3.12
 
@@ -36,8 +32,11 @@ jobs:
     - name: Initialize CodeQL
       uses: ./../action/init
       with:
-        tools: linked
+        tools: latest
         languages: python
 
     - name: Analyze
       uses: ./../action/analyze
+      with:
+        upload: false
+        upload-database: false

.github/workflows/query-filters.yml

@@ -11,8 +11,6 @@ on:
     - synchronize
     - reopened
     - ready_for_review
-  schedule:
-    - cron: '0 5 * * *'
   workflow_dispatch: {}
 
 jobs:
@@ -20,8 +18,6 @@ jobs:
     name: Query Filters Tests
     timeout-minutes: 45
     runs-on: ubuntu-latest
-    permissions:
-      contents: read # This permission is needed to allow the GitHub Actions workflow to read the contents of the repository.
     steps:
     - name: Check out repository
       uses: actions/checkout@v4
@@ -29,7 +25,7 @@ jobs:
       id: prepare-test
       uses: ./.github/actions/prepare-test
       with:
-        version: linked
+        version: latest
 
     - name: Check SARIF for default queries with Single include, Single exclude
       uses: ./../action/.github/actions/query-filter-test

.github/workflows/rebuild.yml

@@ -3,7 +3,6 @@ name: Rebuild Action
 on:
   pull_request:
     types: [labeled]
-  workflow_dispatch:
 
 jobs:
   rebuild:
@@ -11,9 +10,6 @@ jobs:
     runs-on: ubuntu-latest
     if: github.event.label.name == 'Rebuild'
 
-    permissions:
-      contents: write # needed to push rebuilt commit
-      pull-requests: write # needed to comment on the PR
     steps:
       - name: Checkout
         uses: actions/checkout@v4
@@ -28,23 +24,6 @@ jobs:
           gh pr edit --repo github/codeql-action "$PR_NUMBER" \
             --remove-label "Rebuild"
 
-      - name: Merge in changes from base branch
-        env:
-          BASE_BRANCH: ${{ github.event.pull_request.base.ref }}
-        run: |
-          git fetch origin "$BASE_BRANCH"
-
-          # Allow merge conflicts in `lib`, since rebuilding should resolve them.
-          git merge "origin/$BASE_BRANCH" || echo "Merge conflicts detected"
-
-          # Check for merge conflicts outside of `lib`. Disable git diff's trailing whitespace check
-          # since `node_modules/@types/semver/README.md` fails it.
-          if git -c core.whitespace=-trailing-space diff --check | grep --invert-match '^lib/'; then
-            echo "Merge conflicts detected outside of lib/ directory. Please resolve them manually."
-            git -c core.whitespace=-trailing-space diff --check | grep --invert-match '^lib/' || true
-            exit 1
-          fi
-
       - name: Compile TypeScript
         run: |
           npm install
@@ -52,7 +31,7 @@ jobs:
           npm run build
 
       - name: Set up Python
-        uses: actions/setup-python@v5
+        uses: actions/setup-python@v4
         with:
           python-version: 3.11
 
@@ -72,8 +51,7 @@ jobs:
           if [ ! -z "$(git status --porcelain)" ]; then
             git config --global user.email "41898282+github-actions[bot]@users.noreply.github.com"
             git config --global user.name "github-actions[bot]"
-            git add --all
-            git commit -m "Rebuild"
+            git commit -am "Rebuild"
             git push origin "HEAD:$BRANCH"
             echo "Pushed a commit to rebuild the Action." \
               "Please mark the PR as ready for review to trigger PR checks." |

.github/workflows/script/check-js.sh

@@ -7,7 +7,7 @@ if [ ! -z "$(git status --porcelain)" ]; then
     >&2 echo "Failed: Repo should be clean before testing!"
     exit 1
 fi
-# Wipe the lib directory in case there are extra unnecessary files in there
+# Wipe the lib directory incase there are extra unnecessary files in there
 rm -rf lib
 # Generate the JavaScript files
 npm run-script build

.github/workflows/script/prepare_changelog.py

@@ -1,37 +0,0 @@
-import os
-import sys
-
-EMPTY_CHANGELOG = 'No changes.\n\n'
-
-# Prepare the changelog for the new release
-# This function will extract the part of the changelog that
-# we want to include in the new release.
-def extract_changelog_snippet(changelog_file, version_tag):
-  output = ''
-  if (not os.path.exists(changelog_file)):
-    output = EMPTY_CHANGELOG
-
-  else:
-    with open('CHANGELOG.md', 'r') as f:
-      lines = f.readlines()
-
-      # Include everything up to, but excluding the second heading
-      found_first_section = False
-      for i, line in enumerate(lines):
-        if line.startswith('## '):
-          if found_first_section:
-            break
-          found_first_section = True
-        output += line
-
-  output += f"See the full [CHANGELOG.md](https://github.com/github/codeql-action/blob/{version_tag}/CHANGELOG.md) for more information."
-
-  return output
-
-
-if len(sys.argv) < 3:
-  raise Exception('Expecting argument: changelog_file version_tag')
-changelog_file = sys.argv[1]
-version_tag = sys.argv[2]
-
-print(extract_changelog_snippet(changelog_file, version_tag))

.github/workflows/script/update-node-modules.sh

@@ -1,12 +1,9 @@
-#!/bin/bash
-set -eu
-
-if [ "$1" != "update" ] && [ "$1" != "check-only" ]; then
+if [ "$1" != "update" && "$1" != "check-only" ]; then
     >&2 echo "Failed: Invalid argument. Must be 'update' or 'check-only'"
     exit 1
 fi
 
-npm install --force -g npm@9.2.0
+sudo npm install --force -g npm@9.2.0
 
 # clean the npm cache to ensure we don't have any files owned by root
 sudo npm cache clean --force

.github/workflows/script/update-required-checks.sh

@@ -2,11 +2,6 @@
 # Update the required checks based on the current branch.
 # Typically, this will be main.
 
-SCRIPT_DIR="$( cd "$( dirname "${BASH_SOURCE[0]}" )" >/dev/null 2>&1 && pwd )"
-REPO_DIR="$(dirname "$SCRIPT_DIR")"
-GRANDPARENT_DIR="$(dirname "$REPO_DIR")"
-source "$GRANDPARENT_DIR/releases.ini"
-
 if ! gh auth status 2>/dev/null; then
   gh auth status
   echo "Failed: Not authorized. This script requires admin access to github/codeql-action through the gh CLI."
@@ -27,29 +22,14 @@ fi
 
 echo "Getting checks for $GITHUB_SHA"
 
-# Ignore any checks with "https://", CodeQL, LGTM, Update, and ESLint checks.
-CHECKS="$(gh api repos/github/codeql-action/commits/"${GITHUB_SHA}"/check-runs --paginate | jq --slurp --compact-output --raw-output '[.[].check_runs.[] | select(.conclusion != "skipped") | .name | select(contains("https://") or . == "CodeQL" or . == "Dependabot" or . == "check-expected-release-files" or contains("Update") or contains("ESLint") or contains("update") or contains("test-setup-python-scripts") | not)] | unique | sort')"
+# Ignore any checks with "https://", CodeQL, LGTM, and Update checks.
+CHECKS="$(gh api repos/github/codeql-action/commits/"${GITHUB_SHA}"/check-runs --paginate | jq --slurp --compact-output --raw-output '[.[].check_runs | .[].name | select(contains("https://") or . == "CodeQL" or . == "Dependabot" or . == "check-expected-release-files" or contains("Update") or contains("update") or contains("test-setup-python-scripts") | not)] | unique | sort')"
 
 echo "$CHECKS" | jq
 
 echo "{\"contexts\": ${CHECKS}}" > checks.json
 
-echo "Updating main"
-gh api --silent -X "PATCH" "repos/github/codeql-action/branches/main/protection/required_status_checks" --input checks.json
-
-# list all branchs on origin remote matching releases/v*
-BRANCHES="$(git ls-remote --heads origin 'releases/v*' | sed 's?.*refs/heads/??' | sort -V)"
-
-for BRANCH in $BRANCHES; do
-
-  # strip exact 'releases/v' prefix from $BRANCH using count of characters
-  VERSION="${BRANCH:10}"
-
-  if [ "$VERSION" -lt "$OLDEST_SUPPORTED_MAJOR_VERSION" ]; then
-    echo "Skipping $BRANCH"
-    continue
-  fi
-
+for BRANCH in main releases/v2; do
   echo "Updating $BRANCH"
   gh api --silent -X "PATCH" "repos/github/codeql-action/branches/$BRANCH/protection/required_status_checks" --input checks.json
 done

.github/workflows/test-codeql-bundle-all.yml

@@ -2,6 +2,9 @@ name: 'PR Check - CodeQL Bundle All'
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
+  # Disable Kotlin analysis while it's incompatible with Kotlin 1.8, until we find a
+  # workaround for our PR checks.
+  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
@@ -13,13 +16,10 @@ on:
     - synchronize
     - reopened
     - ready_for_review
-  schedule:
-    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   test-codeql-bundle-all:
     strategy:
-      fail-fast: false
       matrix:
         include:
         - os: ubuntu-latest
@@ -27,7 +27,7 @@ jobs:
     name: 'CodeQL Bundle All'
     permissions:
       contents: read
-      security-events: read
+      security-events: write
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
@@ -42,12 +42,15 @@ jobs:
     - id: init
       uses: ./../action/init
       with:
-        # We manually exclude Swift from the languages list here, as it is not supported on Ubuntu
-        languages: cpp,csharp,go,java,javascript,python,ruby 
         tools: ${{ steps.prepare-test.outputs.tools-url }}
+    - uses: ./../action/.github/actions/setup-swift
+      with:
+        codeql-path: ${{ steps.init.outputs.codeql-path }}
     - name: Build code
       shell: bash
       run: ./build.sh
     - uses: ./../action/analyze
+      with:
+        upload-database: false
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/update-bundle.yml

@@ -17,9 +17,6 @@ jobs:
   update-bundle:
     if: github.event.release.prerelease && startsWith(github.event.release.tag_name, 'codeql-bundle-')
     runs-on: ubuntu-latest
-    permissions:
-      contents: write # needed to push commits
-      pull-requests: write # needed to create pull requests
     steps:
       - name: Dump environment
         run: env
@@ -57,7 +54,7 @@ jobs:
           cli_version=$(jq -r '.cliVersion' src/defaults.json)
           pr_url=$(gh pr create \
             --title "Update default bundle to $cli_version" \
-            --body "This pull request updates the default CodeQL bundle, as used with \`tools: linked\` and on GHES, to $cli_version." \
+            --body "This pull request updates the default CodeQL bundle, as used with \`tools: latest\` and on GHES, to $cli_version." \
             --assignee "$GITHUB_ACTOR" \
             --draft \
           )

.github/workflows/update-dependencies.yml

@@ -9,9 +9,6 @@ jobs:
     timeout-minutes: 45
     runs-on: macos-latest
     if: contains(github.event.pull_request.labels.*.name, 'Update dependencies') && (github.event.pull_request.head.repo.full_name == 'github/codeql-action')
-    permissions:
-      contents: write # needed to push the updated dependencies
-      pull-requests: write # needed to comment on the PR
     steps:
     - name: Checkout repository
       uses: actions/checkout@v4

.github/workflows/update-proxy-release.yml

@@ -1,101 +0,0 @@
-name: Update dependency proxy release assets
-on:
-  workflow_dispatch:
-    inputs:
-      tag:
-        description: "The tag of CodeQL Bundle release that contains the proxy binaries as release assets"
-        type: string
-        required: true
-
-jobs:
-  update:
-    name: Update code and create PR
-    timeout-minutes: 15
-    runs-on: ubuntu-latest
-    permissions:
-      contents: write # needed to push the updated files
-      pull-requests: write # needed to create the PR
-    env:
-      RELEASE_TAG: ${{ inputs.tag }}
-    steps:
-      - name: Check release tag format
-        id: checks
-        shell: bash
-        run: |
-          if ! [[ $RELEASE_TAG =~ ^codeql-bundle-v[0-9]+\.[0-9]+\.[0-9]+$ ]]; then
-            echo "Invalid release tag: expected a CodeQL bundle tag in the 'codeql-bundle-vM.N.P' format."
-            exit 1
-          fi
-
-          echo "target_branch=dependency-proxy/$RELEASE_TAG" >> $GITHUB_OUTPUT
-
-      - name: Check that the release exists
-        shell: bash
-        env:
-          GITHUB_TOKEN: "${{ secrets.GITHUB_TOKEN }}"
-        run: |
-          (gh release view --repo "$GITHUB_REPOSITORY" --json "assets" "$RELEASE_TAG" && echo "Release found.") || exit 1
-
-      - name: Install Node
-        uses: actions/setup-node@v4
-
-      - name: Checkout repository
-        uses: actions/checkout@v4
-        with:
-          fetch-depth: 0  # ensure we have all tags and can push commits
-          ref: main
-
-      - name: Update git config
-        shell: bash
-        run: |
-          git config --global user.email "41898282+github-actions[bot]@users.noreply.github.com"
-          git config --global user.name "github-actions[bot]"
-
-      - name: Update release tag and version
-        shell: bash
-        run: |
-          NOW=$(date +"%Y%m%d%H%M%S") # only used to make sure we don't fetch stale binaries from the toolcache
-          sed -i "s|https://github.com/github/codeql-action/releases/download/codeql-bundle-v[0-9.]\+/|https://github.com/github/codeql-action/releases/download/$RELEASE_TAG/|g" ./src/start-proxy-action.ts
-          sed -i "s/\"v2.0.[0-9]\+\"/\"v2.0.$NOW\"/g" ./src/start-proxy-action.ts
-
-      - name: Compile TypeScript and commit changes
-        shell: bash
-        env:
-          TARGET_BRANCH: ${{ steps.checks.outputs.target_branch }}
-        run: |
-          set -exu
-          git checkout -b "$TARGET_BRANCH"
-
-          npm run build
-          git add ./src/start-proxy-action.ts
-          git add ./lib
-          git commit -m "Update release used by \`start-proxy\` action"
-
-      - name: Push changes and open PR
-        shell: bash
-        env:
-          GITHUB_TOKEN: "${{ secrets.GITHUB_TOKEN }}"
-          TARGET_BRANCH: ${{ steps.checks.outputs.target_branch }}
-          PR_FLAG: ${{ (github.event_name == 'workflow_dispatch' && '--draft') || '--dry-run' }}
-        run: |
-          set -exu
-          pr_title="Update release used by \`start-proxy\` to \`$RELEASE_TAG\`"
-          pr_body=$(cat << EOF
-            This PR updates the \`start-proxy\` action to use the private registry proxy binaries that
-            are attached as release assets to the \`$RELEASE_TAG\` release.
-
-
-            Please do the following before merging:
-
-            - [ ] Verify that the changes to the code are correct.
-            - [ ] Mark the PR as ready for review to trigger the CI.
-          EOF
-          )
-
-          git push origin "$TARGET_BRANCH"
-          gh pr create \
-            --head "$TARGET_BRANCH" \
-            --base "main" \
-            --title "${pr_title}" \
-            --body "${pr_body}" \
-            $PR_FLAG

.github/workflows/update-release-branch.yml

@@ -22,8 +22,6 @@ jobs:
       latest_tag: ${{ steps.versions.outputs.latest_tag }}
       backport_source_branch: ${{ steps.branches.outputs.backport_source_branch }}
       backport_target_branches: ${{ steps.branches.outputs.backport_target_branches }}
-    permissions:
-      contents: read
     steps:
     - uses: actions/checkout@v4
       with:
@@ -65,9 +63,6 @@ jobs:
       REPOSITORY: "${{ github.repository }}"
       MAJOR_VERSION: "${{ needs.prepare.outputs.major_version }}"
       LATEST_TAG: "${{ needs.prepare.outputs.latest_tag }}"
-    permissions:
-      contents: write # needed to push commits
-      pull-requests: write # needed to create pull request
     steps:
     - uses: actions/checkout@v4
       with:
@@ -109,7 +104,6 @@ jobs:
   backport:
     timeout-minutes: 45
     runs-on: ubuntu-latest
-    environment: Automation
     needs: [prepare]
     if: ${{ (github.event_name == 'push') && needs.prepare.outputs.backport_target_branches != '[]' }}
     strategy:
@@ -119,22 +113,10 @@ jobs:
     env:
       SOURCE_BRANCH: ${{ needs.prepare.outputs.backport_source_branch }}
       TARGET_BRANCH: ${{ matrix.target_branch }}
-    permissions:
-      contents: write # needed to push commits
-      pull-requests: write # needed to create pull request
     steps:
-    - name: Generate token
-      uses: actions/create-github-app-token@v2.0.6
-      id: app-token
-      with:
-        app-id: ${{ vars.AUTOMATION_APP_ID }}
-        private-key: ${{ secrets.AUTOMATION_PRIVATE_KEY }}
-
-    - name: Checkout
-      uses: actions/checkout@v4
+    - uses: actions/checkout@v4
       with:
         fetch-depth: 0  # Need full history for calculation of diffs
-        token: ${{ steps.app-token.outputs.token }}
     - uses: ./.github/actions/release-initialise
 
     - name: Update older release branch

.github/workflows/update-supported-enterprise-server-versions.yml

@@ -10,23 +10,20 @@ jobs:
     name: Update Supported Enterprise Server Versions
     timeout-minutes: 45
     runs-on: ubuntu-latest
-    if: github.repository == 'github/codeql-action'
-    permissions:
-      contents: write # needed to push commits
-      pull-requests: write # needed to create pull request
+    if: ${{ github.repository == 'github/codeql-action' }}
 
     steps:
       - name: Setup Python
-        uses: actions/setup-python@v5
+        uses: actions/setup-python@v4
         with:
-          python-version: "3.13"
+          python-version: "3.7"
       - name: Checkout CodeQL Action
         uses: actions/checkout@v4
       - name: Checkout Enterprise Releases
         uses: actions/checkout@v4
         with:
           repository: github/enterprise-releases
-          token: ${{ secrets.ENTERPRISE_RELEASE_TOKEN }}
+          ssh-key: ${{ secrets.ENTERPRISE_RELEASES_SSH_KEY }}
           path: ${{ github.workspace }}/enterprise-releases/
       - name: Update Supported Enterprise Server Versions
         run: |
@@ -57,8 +54,7 @@ jobs:
             git push origin update-supported-enterprise-server-versions
 
             body="This PR updates the list of supported GitHub Enterprise Server versions, either because a new "
-            body+="version is about to be feature frozen, or because an old release has been deprecated."
-            body+=$'\n\n'
+            body+="version is about to be feature frozen, or because an old release has been deprecated.\n\n"
             body+="If an old release has been deprecated, please follow the instructions in CONTRIBUTING.md to "
             body+="deprecate the corresponding version of CodeQL."
 

.gitignore

@@ -1,11 +1,2 @@
 # Ignore for example failing-tests.json from AVA
-node_modules/.cache/
-# Java build files
-.gradle/
-*.class
-# macOS
-.DS_Store
-# eslint sarif report
-eslint.sarif
-# for local incremental compilation
-tsconfig.tsbuildinfo
+node_modules/.cache

.pre-commit-config.yaml

@@ -1,20 +1,20 @@
 repos:
   - repo: local
     hooks:
-      - id: lint-ts
-        name: Lint typescript code
-        files: \.ts$
-        language: system
-        entry: npm run lint -- --fix
       - id: compile-ts
         name: Compile typescript
         files: \.[tj]s$
         language: system
         entry: npm run build
         pass_filenames: false
+      - id: lint-ts
+        name: Lint typescript code
+        files: \.ts$
+        language: system
+        entry: npm run lint -- --fix
       - id: pr-checks-sync
         name: Synchronize PR check workflows
         files: ^.github/workflows/__.*\.yml$|^pr-checks
         language: system
-        entry: pr-checks/sync.sh
+        entry: python3 pr-checks/sync.py
         pass_filenames: false

CHANGELOG.md

@@ -2,402 +2,10 @@
 
 See the [releases page](https://github.com/github/codeql-action/releases) for the relevant changes to the CodeQL CLI and language packs.
 
-## 3.29.5 - 29 Jul 2025
-
-- Update default CodeQL bundle version to 2.22.2. [#2986](https://github.com/github/codeql-action/pull/2986)
-
-## 3.29.4 - 23 Jul 2025
-
-No user facing changes.
-
-## 3.29.3 - 21 Jul 2025
-
-No user facing changes.
-
-## 3.29.2 - 30 Jun 2025
-
-- Experimental: When the `quality-queries` input for the `init` action is provided with an argument, separate `.quality.sarif` files are produced and uploaded for each language with the results of the specified queries. Do not use this in production as it is part of an internal experiment and subject to change at any time. [#2935](https://github.com/github/codeql-action/pull/2935)
-
-## 3.29.1 - 27 Jun 2025
-
-- Fix bug in PR analysis where user-provided `include` query filter fails to exclude non-included queries. [#2938](https://github.com/github/codeql-action/pull/2938)
-- Update default CodeQL bundle version to 2.22.1. [#2950](https://github.com/github/codeql-action/pull/2950)
-
-## 3.29.0 - 11 Jun 2025
-
-- Update default CodeQL bundle version to 2.22.0. [#2925](https://github.com/github/codeql-action/pull/2925)
-- Bump minimum CodeQL bundle version to 2.16.6. [#2912](https://github.com/github/codeql-action/pull/2912)
-
-## 3.28.21 - 28 July 2025
-
-No user facing changes.
-
-## 3.28.20 - 21 July 2025
-
-- Remove support for combining SARIF files from a single upload for GHES 3.18, see [the changelog post](https://github.blog/changelog/2024-05-06-code-scanning-will-stop-combining-runs-from-a-single-upload/). [#2959](https://github.com/github/codeql-action/pull/2959)
-
-## 3.28.19 - 03 Jun 2025
-
-- The CodeQL Action no longer includes its own copy of the extractor for the `actions` language, which is currently in public preview.
-  The `actions` extractor has been included in the CodeQL CLI since v2.20.6. If your workflow has enabled the `actions` language _and_ you have pinned
-  your `tools:` property to a specific version of the CodeQL CLI earlier than v2.20.6, you will need to update to at least CodeQL v2.20.6 or disable
-  `actions` analysis.
-- Update default CodeQL bundle version to 2.21.4. [#2910](https://github.com/github/codeql-action/pull/2910)
-
-## 3.28.18 - 16 May 2025
-
-- Update default CodeQL bundle version to 2.21.3. [#2893](https://github.com/github/codeql-action/pull/2893)
-- Skip validating SARIF produced by CodeQL for improved performance. [#2894](https://github.com/github/codeql-action/pull/2894)
-- The number of threads and amount of RAM used by CodeQL can now be set via the `CODEQL_THREADS` and `CODEQL_RAM` runner environment variables. If set, these environment variables override the `threads` and `ram` inputs respectively. [#2891](https://github.com/github/codeql-action/pull/2891)
-
-## 3.28.17 - 02 May 2025
-
-- Update default CodeQL bundle version to 2.21.2. [#2872](https://github.com/github/codeql-action/pull/2872)
-
-## 3.28.16 - 23 Apr 2025
-
-- Update default CodeQL bundle version to 2.21.1. [#2863](https://github.com/github/codeql-action/pull/2863)
-
-## 3.28.15 - 07 Apr 2025
-
-- Fix bug where the action would fail if it tried to produce a debug artifact with more than 65535 files. [#2842](https://github.com/github/codeql-action/pull/2842)
-
-## 3.28.14 - 07 Apr 2025
-
-- Update default CodeQL bundle version to 2.21.0. [#2838](https://github.com/github/codeql-action/pull/2838)
-
-## 3.28.13 - 24 Mar 2025
-
-No user facing changes.
-
-## 3.28.12 - 19 Mar 2025
-
-- Dependency caching should now cache more dependencies for Java `build-mode: none` extractions. This should speed up workflows and avoid inconsistent alerts in some cases.
-- Update default CodeQL bundle version to 2.20.7. [#2810](https://github.com/github/codeql-action/pull/2810)
-
-## 3.28.11 - 07 Mar 2025
-
-- Update default CodeQL bundle version to 2.20.6. [#2793](https://github.com/github/codeql-action/pull/2793)
-
-## 3.28.10 - 21 Feb 2025
-
-- Update default CodeQL bundle version to 2.20.5. [#2772](https://github.com/github/codeql-action/pull/2772)
-- Address an issue where the CodeQL Bundle would occasionally fail to decompress on macOS. [#2768](https://github.com/github/codeql-action/pull/2768)
-
-## 3.28.9 - 07 Feb 2025
-
-- Update default CodeQL bundle version to 2.20.4. [#2753](https://github.com/github/codeql-action/pull/2753)
-
-## 3.28.8 - 29 Jan 2025
-
-- Enable support for Kotlin 2.1.10 when running with CodeQL CLI v2.20.3. [#2744](https://github.com/github/codeql-action/pull/2744)
-
-## 3.28.7 - 29 Jan 2025
-
-No user facing changes.
-
-## 3.28.6 - 27 Jan 2025
-
-- Re-enable debug artifact upload for CLI versions 2.20.3 or greater. [#2726](https://github.com/github/codeql-action/pull/2726)
-
-## 3.28.5 - 24 Jan 2025
-
-- Update default CodeQL bundle version to 2.20.3. [#2717](https://github.com/github/codeql-action/pull/2717)
-
-## 3.28.4 - 23 Jan 2025
-
-No user facing changes.
-
-## 3.28.3 - 22 Jan 2025
-
-- Update default CodeQL bundle version to 2.20.2. [#2707](https://github.com/github/codeql-action/pull/2707)
-- Fix an issue downloading the CodeQL Bundle from a GitHub Enterprise Server instance which occurred when the CodeQL Bundle had been synced to the instance using the [CodeQL Action sync tool](https://github.com/github/codeql-action-sync-tool) and the Actions runner did not have Zstandard installed. [#2710](https://github.com/github/codeql-action/pull/2710)
-- Uploading debug artifacts for CodeQL analysis is temporarily disabled. [#2712](https://github.com/github/codeql-action/pull/2712)
-
-## 3.28.2 - 21 Jan 2025
-
-No user facing changes.
-
-## 3.28.1 - 10 Jan 2025
-
-- CodeQL Action v2 is now deprecated, and is no longer updated or supported. For better performance, improved security, and new features, upgrade to v3. For more information, see [this changelog post](https://github.blog/changelog/2025-01-10-code-scanning-codeql-action-v2-is-now-deprecated/). [#2677](https://github.com/github/codeql-action/pull/2677)
-- Update default CodeQL bundle version to 2.20.1. [#2678](https://github.com/github/codeql-action/pull/2678)
-
-## 3.28.0 - 20 Dec 2024
-
-- Bump the minimum CodeQL bundle version to 2.15.5. [#2655](https://github.com/github/codeql-action/pull/2655)
-- Don't fail in the unusual case that a file is on the search path. [#2660](https://github.com/github/codeql-action/pull/2660).
-
-## 3.27.9 - 12 Dec 2024
-
-No user facing changes.
-
-## 3.27.8 - 12 Dec 2024
-
-- Fixed an issue where streaming the download and extraction of the CodeQL bundle did not respect proxy settings. [#2624](https://github.com/github/codeql-action/pull/2624)
-
-## 3.27.7 - 10 Dec 2024
-
-- We are rolling out a change in December 2024 that will extract the CodeQL bundle directly to the toolcache to improve performance. [#2631](https://github.com/github/codeql-action/pull/2631)
-- Update default CodeQL bundle version to 2.20.0. [#2636](https://github.com/github/codeql-action/pull/2636)
-
-## 3.27.6 - 03 Dec 2024
-
-- Update default CodeQL bundle version to 2.19.4. [#2626](https://github.com/github/codeql-action/pull/2626)
-
-## 3.27.5 - 19 Nov 2024
-
-No user facing changes.
-
-## 3.27.4 - 14 Nov 2024
-
-No user facing changes.
-
-## 3.27.3 - 12 Nov 2024
-
-No user facing changes.
-
-## 3.27.2 - 12 Nov 2024
-
-- Fixed an issue where setting up the CodeQL tools would sometimes fail with the message "Invalid value 'undefined' for header 'authorization'". [#2590](https://github.com/github/codeql-action/pull/2590)
-
-## 3.27.1 - 08 Nov 2024
-
-- The CodeQL Action now downloads bundles compressed using Zstandard on GitHub Enterprise Server when using Linux or macOS runners. This speeds up the installation of the CodeQL tools. This feature is already available to GitHub.com users. [#2573](https://github.com/github/codeql-action/pull/2573)
-- Update default CodeQL bundle version to 2.19.3. [#2576](https://github.com/github/codeql-action/pull/2576)
-
-## 3.27.0 - 22 Oct 2024
-
-- Bump the minimum CodeQL bundle version to 2.14.6. [#2549](https://github.com/github/codeql-action/pull/2549)
-- Fix an issue where the `upload-sarif` Action would fail with "upload-sarif post-action step failed: Input required and not supplied: token" when called in a composite Action that had a different set of inputs to the ones expected by the `upload-sarif` Action. [#2557](https://github.com/github/codeql-action/pull/2557)
-- Update default CodeQL bundle version to 2.19.2. [#2552](https://github.com/github/codeql-action/pull/2552)
-
-## 3.26.13 - 14 Oct 2024
-
-No user facing changes.
-
-## 3.26.12 - 07 Oct 2024
-
-- _Upcoming breaking change_: Add a deprecation warning for customers using CodeQL version 2.14.5 and earlier. These versions of CodeQL were discontinued on 24 September 2024 alongside GitHub Enterprise Server 3.10, and will be unsupported by CodeQL Action versions 3.27.0 and later and versions 2.27.0 and later. [#2520](https://github.com/github/codeql-action/pull/2520)
-
-  - If you are using one of these versions, please update to CodeQL CLI version 2.14.6 or later. For instance, if you have specified a custom version of the CLI using the 'tools' input to the 'init' Action, you can remove this input to use the default version.
-
-  - Alternatively, if you want to continue using a version of the CodeQL CLI between 2.13.5 and 2.14.5, you can replace `github/codeql-action/*@v3` by `github/codeql-action/*@v3.26.11` and `github/codeql-action/*@v2` by `github/codeql-action/*@v2.26.11` in your code scanning workflow to ensure you continue using this version of the CodeQL Action.
-
-## 3.26.11 - 03 Oct 2024
-
-- _Upcoming breaking change_: Add support for using `actions/download-artifact@v4` to programmatically consume CodeQL Action debug artifacts.
-
-  Starting November 30, 2024, GitHub.com customers will [no longer be able to use `actions/download-artifact@v3`](https://github.blog/changelog/2024-04-16-deprecation-notice-v3-of-the-artifact-actions/). Therefore, to avoid breakage, customers who programmatically download the CodeQL Action debug artifacts should set the `CODEQL_ACTION_ARTIFACT_V4_UPGRADE` environment variable to `true` and bump `actions/download-artifact@v3` to `actions/download-artifact@v4` in their workflows. The CodeQL Action will enable this behavior by default in early November and workflows that have not yet bumped `actions/download-artifact@v3` to `actions/download-artifact@v4` will begin failing then.
-
-  This change is currently unavailable for GitHub Enterprise Server customers, as `actions/upload-artifact@v4` and `actions/download-artifact@v4` are not yet compatible with GHES.
-- Update default CodeQL bundle version to 2.19.1. [#2519](https://github.com/github/codeql-action/pull/2519)
-
-## 3.26.10 - 30 Sep 2024
-
-- We are rolling out a feature in September/October 2024 that sets up CodeQL using a bundle compressed with [Zstandard](http://facebook.github.io/zstd/). Our aim is to improve the performance of setting up CodeQL. [#2502](https://github.com/github/codeql-action/pull/2502)
-
-## 3.26.9 - 24 Sep 2024
-
-No user facing changes.
-
-## 3.26.8 - 19 Sep 2024
-
-- Update default CodeQL bundle version to 2.19.0. [#2483](https://github.com/github/codeql-action/pull/2483)
-
-## 3.26.7 - 13 Sep 2024
-
-- Update default CodeQL bundle version to 2.18.4. [#2471](https://github.com/github/codeql-action/pull/2471)
-
-## 3.26.6 - 29 Aug 2024
-
-- Update default CodeQL bundle version to 2.18.3. [#2449](https://github.com/github/codeql-action/pull/2449)
-
-## 3.26.5 - 23 Aug 2024
-
-- Fix an issue where the `csrutil` system call used for telemetry would fail on macOS ARM machines with System Integrity Protection disabled. [#2441](https://github.com/github/codeql-action/pull/2441)
-
-## 3.26.4 - 21 Aug 2024
-
-- _Deprecation:_ The `add-snippets` input on the `analyze` Action is deprecated and will be removed in the first release in August 2025. [#2436](https://github.com/github/codeql-action/pull/2436)
-- Fix an issue where the disk usage system call used for telemetry would fail on macOS ARM machines with System Integrity Protection disabled, and then surface a warning. The system call is now disabled for these machines. [#2434](https://github.com/github/codeql-action/pull/2434)
-
-## 3.26.3 - 19 Aug 2024
-
-- Fix an issue where the CodeQL Action could not write diagnostic messages on Windows. This issue did not impact analysis quality. [#2430](https://github.com/github/codeql-action/pull/2430)
-
-## 3.26.2 - 14 Aug 2024
-
-- Update default CodeQL bundle version to 2.18.2. [#2417](https://github.com/github/codeql-action/pull/2417)
-
-## 3.26.1 - 13 Aug 2024
-
-No user facing changes.
-
-## 3.26.0 - 06 Aug 2024
-
-- _Deprecation:_ Swift analysis on Ubuntu runner images is no longer supported. Please migrate to a macOS runner if this affects you. [#2403](https://github.com/github/codeql-action/pull/2403)
-- Bump the minimum CodeQL bundle version to 2.13.5. [#2408](https://github.com/github/codeql-action/pull/2408)
-
-## 3.25.15 - 26 Jul 2024
-
-- Update default CodeQL bundle version to 2.18.1. [#2385](https://github.com/github/codeql-action/pull/2385)
-
-## 3.25.14 - 25 Jul 2024
-
-- Experimental: add a new `start-proxy` action which starts the same HTTP proxy as used by [`github/dependabot-action`](https://github.com/github/dependabot-action). Do not use this in production as it is part of an internal experiment and subject to change at any time. [#2376](https://github.com/github/codeql-action/pull/2376)
-
-## 3.25.13 - 19 Jul 2024
-
-- Add `codeql-version` to outputs. [#2368](https://github.com/github/codeql-action/pull/2368)
-- Add a deprecation warning for customers using CodeQL version 2.13.4 and earlier. These versions of CodeQL were discontinued on 9 July 2024 alongside GitHub Enterprise Server 3.9, and will be unsupported by CodeQL Action versions 3.26.0 and later and versions 2.26.0 and later. [#2375](https://github.com/github/codeql-action/pull/2375)
-  - If you are using one of these versions, please update to CodeQL CLI version 2.13.5 or later. For instance, if you have specified a custom version of the CLI using the 'tools' input to the 'init' Action, you can remove this input to use the default version.
-  - Alternatively, if you want to continue using a version of the CodeQL CLI between 2.12.6 and 2.13.4, you can replace `github/codeql-action/*@v3` by `github/codeql-action/*@v3.25.13` and `github/codeql-action/*@v2` by `github/codeql-action/*@v2.25.13` in your code scanning workflow to ensure you continue using this version of the CodeQL Action.
-
-## 3.25.12 - 12 Jul 2024
-
-- Improve the reliability and performance of analyzing code when analyzing a compiled language with the `autobuild` [build mode](https://docs.github.com/en/code-security/code-scanning/creating-an-advanced-setup-for-code-scanning/codeql-code-scanning-for-compiled-languages#codeql-build-modes) on GitHub Enterprise Server. This feature is already available to GitHub.com users. [#2353](https://github.com/github/codeql-action/pull/2353)
-- Update default CodeQL bundle version to 2.18.0. [#2364](https://github.com/github/codeql-action/pull/2364)
-
-## 3.25.11 - 28 Jun 2024
-
-- Avoid failing the workflow run if there is an error while uploading debug artifacts. [#2349](https://github.com/github/codeql-action/pull/2349)
-- Update default CodeQL bundle version to 2.17.6. [#2352](https://github.com/github/codeql-action/pull/2352)
-
-## 3.25.10 - 13 Jun 2024
-
-- Update default CodeQL bundle version to 2.17.5. [#2327](https://github.com/github/codeql-action/pull/2327)
-
-## 3.25.9 - 12 Jun 2024
-
-- Avoid failing database creation if the database folder already exists and contains some unexpected files. Requires CodeQL 2.18.0 or higher. [#2330](https://github.com/github/codeql-action/pull/2330)
-- The init Action will attempt to clean up the database cluster directory before creating a new database and at the end of the job. This will help to avoid issues where the database cluster directory is left in an inconsistent state. [#2332](https://github.com/github/codeql-action/pull/2332)
-
-## 3.25.8 - 04 Jun 2024
-
-- Update default CodeQL bundle version to 2.17.4. [#2321](https://github.com/github/codeql-action/pull/2321)
-
-## 3.25.7 - 31 May 2024
-
-- We are rolling out a feature in May/June 2024 that will reduce the Actions cache usage of the Action by keeping only the newest TRAP cache for each language. [#2306](https://github.com/github/codeql-action/pull/2306)
-
-## 3.25.6 - 20 May 2024
-
-- Update default CodeQL bundle version to 2.17.3. [#2295](https://github.com/github/codeql-action/pull/2295)
-
-## 3.25.5 - 13 May 2024
-
-- Add a compatibility matrix of supported CodeQL Action, CodeQL CLI, and GitHub Enterprise Server versions to the [README.md](README.md). [#2273](https://github.com/github/codeql-action/pull/2273)
-- Avoid printing out a warning for a missing `on.push` trigger when the CodeQL Action is triggered via a `workflow_call` event. [#2274](https://github.com/github/codeql-action/pull/2274)
-- The `tools: latest` input to the `init` Action has been renamed to `tools: linked`. This option specifies that the Action should use the tools shipped at the same time as the Action. The old name will continue to work for backwards compatibility, but we recommend that new workflows use the new name. [#2281](https://github.com/github/codeql-action/pull/2281)
-
-## 3.25.4 - 08 May 2024
-
-- Update default CodeQL bundle version to 2.17.2. [#2270](https://github.com/github/codeql-action/pull/2270)
-
-## 3.25.3 - 25 Apr 2024
-
-- Update default CodeQL bundle version to 2.17.1. [#2247](https://github.com/github/codeql-action/pull/2247)
-- Workflows running on `macos-latest` using CodeQL CLI versions before v2.15.1 will need to either upgrade their CLI version to v2.15.1 or newer, or change the platform to an Intel macOS runner, such as `macos-12`. ARM machines with SIP disabled, including the newest `macos-latest` image, are unsupported for CLI versions before 2.15.1. [#2261](https://github.com/github/codeql-action/pull/2261)
-
-## 3.25.2 - 22 Apr 2024
-
-No user facing changes.
-
-## 3.25.1 - 17 Apr 2024
-
-- We are rolling out a feature in April/May 2024 that improves the reliability and performance of analyzing code when analyzing a compiled language with the `autobuild` [build mode](https://docs.github.com/en/code-security/code-scanning/creating-an-advanced-setup-for-code-scanning/codeql-code-scanning-for-compiled-languages#codeql-build-modes). [#2235](https://github.com/github/codeql-action/pull/2235)
-- Fix a bug where the `init` Action would fail if `--overwrite` was specified in `CODEQL_ACTION_EXTRA_OPTIONS`. [#2245](https://github.com/github/codeql-action/pull/2245)
-
-## 3.25.0 - 15 Apr 2024
-
-- The deprecated feature for extracting dependencies for a Python analysis has been removed. [#2224](https://github.com/github/codeql-action/pull/2224)
-
-  As a result, the following inputs and environment variables are now ignored:
-
-  - The `setup-python-dependencies` input to the `init` Action
-  - The `CODEQL_ACTION_DISABLE_PYTHON_DEPENDENCY_INSTALLATION` environment variable
-
-  We recommend removing any references to these from your workflows. For more information, see the release notes for CodeQL Action v3.23.0 and v2.23.0.
-- Automatically overwrite an existing database if found on the filesystem. [#2229](https://github.com/github/codeql-action/pull/2229)
-- Bump the minimum CodeQL bundle version to 2.12.6. [#2232](https://github.com/github/codeql-action/pull/2232)
-- A more relevant log message and a diagnostic are now emitted when the `file` program is not installed on a Linux runner, but is required for Go tracing to succeed. [#2234](https://github.com/github/codeql-action/pull/2234)
-
-## 3.24.10 - 05 Apr 2024
-
-- Update default CodeQL bundle version to 2.17.0. [#2219](https://github.com/github/codeql-action/pull/2219)
-- Add a deprecation warning for customers using CodeQL version 2.12.5 and earlier. These versions of CodeQL were discontinued on 26 March 2024 alongside GitHub Enterprise Server 3.8, and will be unsupported by CodeQL Action versions 3.25.0 and later and versions 2.25.0 and later. [#2220](https://github.com/github/codeql-action/pull/2220)
-  - If you are using one of these versions, please update to CodeQL CLI version 2.12.6 or later. For instance, if you have specified a custom version of the CLI using the 'tools' input to the 'init' Action, you can remove this input to use the default version.
-  - Alternatively, if you want to continue using a version of the CodeQL CLI between 2.11.6 and 2.12.5, you can replace `github/codeql-action/*@v3` by `github/codeql-action/*@v3.24.10` and `github/codeql-action/*@v2` by `github/codeql-action/*@v2.24.10` in your code scanning workflow to ensure you continue using this version of the CodeQL Action.
-
-## 3.24.9 - 22 Mar 2024
-
-- Update default CodeQL bundle version to 2.16.5. [#2203](https://github.com/github/codeql-action/pull/2203)
-
-## 3.24.8 - 18 Mar 2024
-
-- Improve the ease of debugging extraction issues by increasing the verbosity of the extractor logs when running in debug mode. [#2195](https://github.com/github/codeql-action/pull/2195)
-
-## 3.24.7 - 12 Mar 2024
-
-- Update default CodeQL bundle version to 2.16.4. [#2185](https://github.com/github/codeql-action/pull/2185)
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-## 3.24.6 - 29 Feb 2024
-
-No user facing changes.
-
-## 3.24.5 - 23 Feb 2024
-
-- Update default CodeQL bundle version to 2.16.3. [#2156](https://github.com/github/codeql-action/pull/2156)
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-## 3.24.4 - 21 Feb 2024
-
-- Fix an issue where an existing, but empty, `/sys/fs/cgroup/cpuset.cpus` file always resulted in a single-threaded run. [#2151](https://github.com/github/codeql-action/pull/2151)
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-## 3.24.3 - 15 Feb 2024
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-- Fix an issue where the CodeQL Action would fail to load a configuration specified by the `config` input to the `init` Action. [#2147](https://github.com/github/codeql-action/pull/2147)
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-## 3.24.2 - 15 Feb 2024
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-- Enable improved multi-threaded performance on larger runners for GitHub Enterprise Server users. This feature is already available to GitHub.com users. [#2141](https://github.com/github/codeql-action/pull/2141)
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-## 3.24.1 - 13 Feb 2024
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-- Update default CodeQL bundle version to 2.16.2. [#2124](https://github.com/github/codeql-action/pull/2124)
-- The CodeQL action no longer fails if it can't write to the telemetry api endpoint. [#2121](https://github.com/github/codeql-action/pull/2121)
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-## 3.24.0 - 02 Feb 2024
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-- CodeQL Python analysis will no longer install dependencies on GitHub Enterprise Server, as is already the case for GitHub.com. See [release notes for 3.23.0](#3230---08-jan-2024) for more details. [#2106](https://github.com/github/codeql-action/pull/2106)
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-## 3.23.2 - 26 Jan 2024
-
-- On Linux, the maximum possible value for the `--threads` option now respects the CPU count as specified in `cgroup` files to more accurately reflect the number of available cores when running in containers. [#2083](https://github.com/github/codeql-action/pull/2083)
-- Update default CodeQL bundle version to 2.16.1. [#2096](https://github.com/github/codeql-action/pull/2096)
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-## 3.23.1 - 17 Jan 2024
-
-- Update default CodeQL bundle version to 2.16.0. [#2073](https://github.com/github/codeql-action/pull/2073)
-- Change the retention period for uploaded debug artifacts to 7 days. Previously, this was whatever the repository default was. [#2079](https://github.com/github/codeql-action/pull/2079)
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-## 3.23.0 - 08 Jan 2024
-
-- We are rolling out a feature in January 2024 that will disable Python dependency installation by default for all users. This improves the speed of analysis while having only a very minor impact on results. You can override this behavior by setting `CODEQL_ACTION_DISABLE_PYTHON_DEPENDENCY_INSTALLATION=false` in your workflow, however we plan to remove this ability in future versions of the CodeQL Action. [#2031](https://github.com/github/codeql-action/pull/2031)
-- The CodeQL Action now requires CodeQL version 2.11.6 or later. For more information, see [the corresponding changelog entry for CodeQL Action version 2.22.7](#2227---16-nov-2023). [#2009](https://github.com/github/codeql-action/pull/2009)
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-## 3.22.12 - 22 Dec 2023
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-- Update default CodeQL bundle version to 2.15.5. [#2047](https://github.com/github/codeql-action/pull/2047)
-
-## 3.22.11 - 13 Dec 2023
+## [UNRELEASED]
 
 - [v3+ only] The CodeQL Action now runs on Node.js v20. [#2006](https://github.com/github/codeql-action/pull/2006)
 
-## 2.22.10 - 12 Dec 2023
-
-- Update default CodeQL bundle version to 2.15.4. [#2016](https://github.com/github/codeql-action/pull/2016)
-
 ## 2.22.9 - 07 Dec 2023
 
 No user facing changes.