Marko Mikulicic 31c5ef1bc3 Don't clang-format non checked out things
mbed-os is a directory that gets checked out by the mbed cli
(a tool similar in spirit to miot) and it contains a lot of
.c sources, so many of them that clang-format burns your CPU.

While we're at it, also fix check_no_ifdefs when running under a commit
hook.

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